Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.87■□□□□ 0.93
APOEP02649 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.87■□□□□ 0.93
APOEP02649 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
APOEP02649 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
APOEP02649 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.87■□□□□ 0.93
APOEP02649 AC005829.2-201ENST00000571422 1056 ntBASIC20.87■□□□□ 0.93
APOEP02649 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
APOEP02649 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
APOEP02649 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
APOEP02649 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
APOEP02649 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
APOEP02649 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 TSPY20P-201ENST00000450910 630 ntBASIC20.86■□□□□ 0.93
APOEP02649 FAM201B-201ENST00000458407 597 ntBASIC20.86■□□□□ 0.93
APOEP02649 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
APOEP02649 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 AP003097.1-201ENST00000530657 1135 ntBASIC20.86■□□□□ 0.93
APOEP02649 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 SOX15-203ENST00000570788 1093 ntBASIC20.86■□□□□ 0.93
APOEP02649 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.86■□□□□ 0.93
APOEP02649 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
APOEP02649 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.86■□□□□ 0.93
APOEP02649 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.86■□□□□ 0.93
APOEP02649 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.86■□□□□ 0.93
APOEP02649 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.86■□□□□ 0.93
APOEP02649 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APOEP02649 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.85■□□□□ 0.93
APOEP02649 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.85■□□□□ 0.93
APOEP02649 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
APOEP02649 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APOEP02649 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
APOEP02649 HLA-G-202ENST00000376815 851 ntBASIC20.85■□□□□ 0.93
APOEP02649 HLA-G-203ENST00000376818 1127 ntBASIC20.85■□□□□ 0.93
APOEP02649 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.85■□□□□ 0.93
APOEP02649 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.85■□□□□ 0.93
APOEP02649 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.85■□□□□ 0.93
APOEP02649 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.85■□□□□ 0.93
APOEP02649 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
APOEP02649 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
APOEP02649 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.85■□□□□ 0.93
APOEP02649 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
APOEP02649 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.85■□□□□ 0.93
APOEP02649 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APOEP02649 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.84■□□□□ 0.93
APOEP02649 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
APOEP02649 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.84■□□□□ 0.93
APOEP02649 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APOEP02649 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
APOEP02649 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APOEP02649 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.84■□□□□ 0.93
APOEP02649 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.84■□□□□ 0.93
APOEP02649 ESRRAP1-201ENST00000400596 1257 ntBASIC20.84■□□□□ 0.93
APOEP02649 POU5F1P3-201ENST00000428824 1078 ntBASIC20.84■□□□□ 0.93
APOEP02649 UNC93B4-201ENST00000505679 747 ntBASIC20.84■□□□□ 0.93
APOEP02649 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APOEP02649 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
APOEP02649 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
APOEP02649 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.84■□□□□ 0.93
APOEP02649 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APOEP02649 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
APOEP02649 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APOEP02649 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APOEP02649 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
APOEP02649 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
APOEP02649 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.83■□□□□ 0.93
APOEP02649 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.83■□□□□ 0.93
APOEP02649 PTBP1P-201ENST00000554374 1601 ntBASIC20.83■□□□□ 0.93
APOEP02649 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.83■□□□□ 0.93
APOEP02649 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APOEP02649 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.83■□□□□ 0.93
APOEP02649 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.83■□□□□ 0.93
APOEP02649 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
APOEP02649 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
APOEP02649 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
APOEP02649 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
APOEP02649 AC026366.1-201ENST00000488803 879 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms