Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm12728V9GX31 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm12728V9GX31 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm12728V9GX31 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm12728V9GX31 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm12728V9GX31 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Gm12728V9GX31 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.03■□□□□ 0.64
Gm12728V9GX31 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm12728V9GX31 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Gm12728V9GX31 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Gm12728V9GX31 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gm12728V9GX31 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Gm12728V9GX31 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm12728V9GX31 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm12728V9GX31 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.99■□□□□ 0.63
Gm12728V9GX31 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm12728V9GX31 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm12728V9GX31 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Gm12728V9GX31 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12728V9GX31 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12728V9GX31 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12728V9GX31 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12728V9GX31 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12728V9GX31 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12728V9GX31 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.97■□□□□ 0.63
Gm12728V9GX31 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm12728V9GX31 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12728V9GX31 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12728V9GX31 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12728V9GX31 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Gm12728V9GX31 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.95■□□□□ 0.62
Gm12728V9GX31 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm12728V9GX31 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Gm12728V9GX31 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm12728V9GX31 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm12728V9GX31 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm12728V9GX31 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm12728V9GX31 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm12728V9GX31 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm12728V9GX31 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.91■□□□□ 0.62
Gm12728V9GX31 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm12728V9GX31 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12728V9GX31 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12728V9GX31 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Gm12728V9GX31 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12728V9GX31 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gm12728V9GX31 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Gm12728V9GX31 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12728V9GX31 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12728V9GX31 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm12728V9GX31 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gm12728V9GX31 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm12728V9GX31 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm12728V9GX31 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm12728V9GX31 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm12728V9GX31 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm12728V9GX31 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm12728V9GX31 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm12728V9GX31 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm12728V9GX31 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm12728V9GX31 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm12728V9GX31 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.85■□□□□ 0.61
Gm12728V9GX31 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm12728V9GX31 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm12728V9GX31 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Gm12728V9GX31 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm12728V9GX31 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm12728V9GX31 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm12728V9GX31 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm12728V9GX31 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.83■□□□□ 0.6
Gm12728V9GX31 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm12728V9GX31 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12728V9GX31 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12728V9GX31 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12728V9GX31 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12728V9GX31 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12728V9GX31 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm12728V9GX31 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm12728V9GX31 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm12728V9GX31 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm12728V9GX31 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm12728V9GX31 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm12728V9GX31 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gm12728V9GX31 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm12728V9GX31 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm12728V9GX31 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm12728V9GX31 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm12728V9GX31 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm12728V9GX31 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gm12728V9GX31 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm12728V9GX31 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Gm12728V9GX31 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm12728V9GX31 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm12728V9GX31 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12728V9GX31 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12728V9GX31 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12728V9GX31 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12728V9GX31 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12728V9GX31 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm12728V9GX31 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms