Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
H2afb2S4R1M3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
H2afb2S4R1M3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
H2afb2S4R1M3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.91■■□□□ 1.42
H2afb2S4R1M3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.91■■□□□ 1.42
H2afb2S4R1M3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
H2afb2S4R1M3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
H2afb2S4R1M3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
H2afb2S4R1M3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
H2afb2S4R1M3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
H2afb2S4R1M3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
H2afb2S4R1M3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
H2afb2S4R1M3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
H2afb2S4R1M3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
H2afb2S4R1M3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
H2afb2S4R1M3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
H2afb2S4R1M3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
H2afb2S4R1M3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
H2afb2S4R1M3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
H2afb2S4R1M3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
H2afb2S4R1M3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
H2afb2S4R1M3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
H2afb2S4R1M3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
H2afb2S4R1M3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
H2afb2S4R1M3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
H2afb2S4R1M3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
H2afb2S4R1M3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
H2afb2S4R1M3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
H2afb2S4R1M3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
H2afb2S4R1M3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
H2afb2S4R1M3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
H2afb2S4R1M3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
H2afb2S4R1M3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.8■■□□□ 1.4
H2afb2S4R1M3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
H2afb2S4R1M3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
H2afb2S4R1M3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
H2afb2S4R1M3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
H2afb2S4R1M3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
H2afb2S4R1M3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
H2afb2S4R1M3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
H2afb2S4R1M3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
H2afb2S4R1M3 Gm30023-201ENSMUST00000197970 889 ntBASIC23.77■■□□□ 1.4
H2afb2S4R1M3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
H2afb2S4R1M3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
H2afb2S4R1M3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
H2afb2S4R1M3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
H2afb2S4R1M3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
H2afb2S4R1M3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
H2afb2S4R1M3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
H2afb2S4R1M3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
H2afb2S4R1M3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
H2afb2S4R1M3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
H2afb2S4R1M3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
H2afb2S4R1M3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
H2afb2S4R1M3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.74■■□□□ 1.39
H2afb2S4R1M3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
H2afb2S4R1M3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.73■■□□□ 1.39
H2afb2S4R1M3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
H2afb2S4R1M3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
H2afb2S4R1M3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
H2afb2S4R1M3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.73■■□□□ 1.39
H2afb2S4R1M3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H2afb2S4R1M3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
H2afb2S4R1M3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H2afb2S4R1M3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.71■■□□□ 1.39
H2afb2S4R1M3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H2afb2S4R1M3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
H2afb2S4R1M3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
H2afb2S4R1M3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
H2afb2S4R1M3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
H2afb2S4R1M3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
H2afb2S4R1M3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
H2afb2S4R1M3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
H2afb2S4R1M3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
H2afb2S4R1M3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.69■■□□□ 1.38
H2afb2S4R1M3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
H2afb2S4R1M3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
H2afb2S4R1M3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.68■■□□□ 1.38
H2afb2S4R1M3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
H2afb2S4R1M3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
H2afb2S4R1M3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.68■■□□□ 1.38
H2afb2S4R1M3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
H2afb2S4R1M3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
H2afb2S4R1M3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.67■■□□□ 1.38
H2afb2S4R1M3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
H2afb2S4R1M3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.66■■□□□ 1.38
H2afb2S4R1M3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2afb2S4R1M3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
H2afb2S4R1M3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2afb2S4R1M3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
H2afb2S4R1M3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
H2afb2S4R1M3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2afb2S4R1M3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
H2afb2S4R1M3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
H2afb2S4R1M3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
H2afb2S4R1M3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
H2afb2S4R1M3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
H2afb2S4R1M3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
H2afb2S4R1M3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.62■■□□□ 1.37
H2afb2S4R1M3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms