Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tdp2Q9JJX7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Tdp2Q9JJX7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp2Q9JJX7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Tdp2Q9JJX7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Tdp2Q9JJX7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tdp2Q9JJX7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tdp2Q9JJX7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Tdp2Q9JJX7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tdp2Q9JJX7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tdp2Q9JJX7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tdp2Q9JJX7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tdp2Q9JJX7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Tdp2Q9JJX7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.59■■□□□ 1.37
Tdp2Q9JJX7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tdp2Q9JJX7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tdp2Q9JJX7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tdp2Q9JJX7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Tdp2Q9JJX7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Tdp2Q9JJX7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tdp2Q9JJX7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tdp2Q9JJX7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Tdp2Q9JJX7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tdp2Q9JJX7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tdp2Q9JJX7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Tdp2Q9JJX7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Tdp2Q9JJX7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tdp2Q9JJX7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.55■■□□□ 1.36
Tdp2Q9JJX7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Tdp2Q9JJX7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tdp2Q9JJX7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tdp2Q9JJX7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tdp2Q9JJX7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Tdp2Q9JJX7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tdp2Q9JJX7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tdp2Q9JJX7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tdp2Q9JJX7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tdp2Q9JJX7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tdp2Q9JJX7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.49■■□□□ 1.35
Tdp2Q9JJX7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tdp2Q9JJX7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Tdp2Q9JJX7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.49■■□□□ 1.35
Tdp2Q9JJX7 Gm9397-201ENSMUST00000200125 605 ntBASIC23.48■■□□□ 1.35
Tdp2Q9JJX7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tdp2Q9JJX7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tdp2Q9JJX7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tdp2Q9JJX7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Tdp2Q9JJX7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
Tdp2Q9JJX7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Tdp2Q9JJX7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
Tdp2Q9JJX7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Tdp2Q9JJX7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Tdp2Q9JJX7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Tdp2Q9JJX7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tdp2Q9JJX7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tdp2Q9JJX7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tdp2Q9JJX7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tdp2Q9JJX7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Tdp2Q9JJX7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.41■■□□□ 1.34
Tdp2Q9JJX7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tdp2Q9JJX7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Tdp2Q9JJX7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Tdp2Q9JJX7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tdp2Q9JJX7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tdp2Q9JJX7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Tdp2Q9JJX7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
Tdp2Q9JJX7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Tdp2Q9JJX7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Tdp2Q9JJX7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Tdp2Q9JJX7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Tdp2Q9JJX7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Tdp2Q9JJX7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tdp2Q9JJX7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tdp2Q9JJX7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.38■■□□□ 1.33
Tdp2Q9JJX7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tdp2Q9JJX7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tdp2Q9JJX7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Tdp2Q9JJX7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Tdp2Q9JJX7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tdp2Q9JJX7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Tdp2Q9JJX7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Tdp2Q9JJX7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
Tdp2Q9JJX7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tdp2Q9JJX7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tdp2Q9JJX7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tdp2Q9JJX7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tdp2Q9JJX7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Tdp2Q9JJX7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tdp2Q9JJX7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.33■■□□□ 1.33
Tdp2Q9JJX7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tdp2Q9JJX7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tdp2Q9JJX7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Tdp2Q9JJX7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tdp2Q9JJX7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Tdp2Q9JJX7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Tdp2Q9JJX7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Tdp2Q9JJX7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.31■■□□□ 1.32
Tdp2Q9JJX7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.31■■□□□ 1.32
Tdp2Q9JJX7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Tdp2Q9JJX7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms