Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl28Q9JIL2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl28Q9JIL2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl28Q9JIL2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl28Q9JIL2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl28Q9JIL2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccl28Q9JIL2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccl28Q9JIL2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl28Q9JIL2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccl28Q9JIL2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl28Q9JIL2 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.15■□□□□ 0.66
Ccl28Q9JIL2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ccl28Q9JIL2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Ccl28Q9JIL2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.14■□□□□ 0.65
Ccl28Q9JIL2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl28Q9JIL2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl28Q9JIL2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl28Q9JIL2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccl28Q9JIL2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.13■□□□□ 0.65
Ccl28Q9JIL2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.13■□□□□ 0.65
Ccl28Q9JIL2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccl28Q9JIL2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccl28Q9JIL2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccl28Q9JIL2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Ccl28Q9JIL2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ccl28Q9JIL2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccl28Q9JIL2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccl28Q9JIL2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccl28Q9JIL2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ccl28Q9JIL2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccl28Q9JIL2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccl28Q9JIL2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccl28Q9JIL2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccl28Q9JIL2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccl28Q9JIL2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.09■□□□□ 0.65
Ccl28Q9JIL2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccl28Q9JIL2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccl28Q9JIL2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccl28Q9JIL2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccl28Q9JIL2 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.08■□□□□ 0.64
Ccl28Q9JIL2 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.08■□□□□ 0.64
Ccl28Q9JIL2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccl28Q9JIL2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccl28Q9JIL2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ccl28Q9JIL2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Ccl28Q9JIL2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.07■□□□□ 0.64
Ccl28Q9JIL2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccl28Q9JIL2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccl28Q9JIL2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ccl28Q9JIL2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccl28Q9JIL2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccl28Q9JIL2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccl28Q9JIL2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ccl28Q9JIL2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccl28Q9JIL2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccl28Q9JIL2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccl28Q9JIL2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.04■□□□□ 0.64
Ccl28Q9JIL2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccl28Q9JIL2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccl28Q9JIL2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccl28Q9JIL2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccl28Q9JIL2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccl28Q9JIL2 Gm9397-201ENSMUST00000200125 605 ntBASIC19.03■□□□□ 0.64
Ccl28Q9JIL2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccl28Q9JIL2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccl28Q9JIL2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccl28Q9JIL2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccl28Q9JIL2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccl28Q9JIL2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccl28Q9JIL2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccl28Q9JIL2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccl28Q9JIL2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccl28Q9JIL2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccl28Q9JIL2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccl28Q9JIL2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccl28Q9JIL2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccl28Q9JIL2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Ccl28Q9JIL2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccl28Q9JIL2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccl28Q9JIL2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccl28Q9JIL2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.97■□□□□ 0.63
Ccl28Q9JIL2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccl28Q9JIL2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Ccl28Q9JIL2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccl28Q9JIL2 Gm24970-201ENSMUST00000175582 82 ntBASIC18.97■□□□□ 0.63
Ccl28Q9JIL2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.97■□□□□ 0.63
Ccl28Q9JIL2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl28Q9JIL2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl28Q9JIL2 Gm45855-201ENSMUST00000212546 880 ntBASIC18.96■□□□□ 0.63
Ccl28Q9JIL2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Ccl28Q9JIL2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl28Q9JIL2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.95■□□□□ 0.62
Ccl28Q9JIL2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Ccl28Q9JIL2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl28Q9JIL2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl28Q9JIL2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl28Q9JIL2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl28Q9JIL2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl28Q9JIL2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccl28Q9JIL2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 123.3 ms