Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cldnd2Q9D9H2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.47■□□□□ 0.87
Cldnd2Q9D9H2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldnd2Q9D9H2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldnd2Q9D9H2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cldnd2Q9D9H2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cldnd2Q9D9H2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.46■□□□□ 0.87
Cldnd2Q9D9H2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.46■□□□□ 0.87
Cldnd2Q9D9H2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd2Q9D9H2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd2Q9D9H2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd2Q9D9H2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldnd2Q9D9H2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldnd2Q9D9H2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd2Q9D9H2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd2Q9D9H2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd2Q9D9H2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.44■□□□□ 0.86
Cldnd2Q9D9H2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cldnd2Q9D9H2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd2Q9D9H2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd2Q9D9H2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd2Q9D9H2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd2Q9D9H2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldnd2Q9D9H2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldnd2Q9D9H2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cldnd2Q9D9H2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldnd2Q9D9H2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Cldnd2Q9D9H2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Cldnd2Q9D9H2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldnd2Q9D9H2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldnd2Q9D9H2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldnd2Q9D9H2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.38■□□□□ 0.85
Cldnd2Q9D9H2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldnd2Q9D9H2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cldnd2Q9D9H2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cldnd2Q9D9H2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.37■□□□□ 0.85
Cldnd2Q9D9H2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd2Q9D9H2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd2Q9D9H2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd2Q9D9H2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Cldnd2Q9D9H2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cldnd2Q9D9H2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldnd2Q9D9H2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldnd2Q9D9H2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldnd2Q9D9H2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldnd2Q9D9H2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd2Q9D9H2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cldnd2Q9D9H2 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.35■□□□□ 0.85
Cldnd2Q9D9H2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd2Q9D9H2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd2Q9D9H2 Gm27322-201ENSMUST00000184007 104 ntBASIC20.34■□□□□ 0.85
Cldnd2Q9D9H2 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.34■□□□□ 0.85
Cldnd2Q9D9H2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldnd2Q9D9H2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldnd2Q9D9H2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldnd2Q9D9H2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldnd2Q9D9H2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cldnd2Q9D9H2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cldnd2Q9D9H2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldnd2Q9D9H2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldnd2Q9D9H2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldnd2Q9D9H2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldnd2Q9D9H2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldnd2Q9D9H2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cldnd2Q9D9H2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Cldnd2Q9D9H2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldnd2Q9D9H2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd2Q9D9H2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cldnd2Q9D9H2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Cldnd2Q9D9H2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd2Q9D9H2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd2Q9D9H2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd2Q9D9H2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cldnd2Q9D9H2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldnd2Q9D9H2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.27■□□□□ 0.84
Cldnd2Q9D9H2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldnd2Q9D9H2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cldnd2Q9D9H2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldnd2Q9D9H2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cldnd2Q9D9H2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cldnd2Q9D9H2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldnd2Q9D9H2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldnd2Q9D9H2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldnd2Q9D9H2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldnd2Q9D9H2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cldnd2Q9D9H2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldnd2Q9D9H2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldnd2Q9D9H2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldnd2Q9D9H2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Cldnd2Q9D9H2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldnd2Q9D9H2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms