Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtl8cQ9D6I0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtl8cQ9D6I0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Rtl8cQ9D6I0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rtl8cQ9D6I0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl8cQ9D6I0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl8cQ9D6I0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Rtl8cQ9D6I0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl8cQ9D6I0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl8cQ9D6I0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl8cQ9D6I0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl8cQ9D6I0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtl8cQ9D6I0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl8cQ9D6I0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rtl8cQ9D6I0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl8cQ9D6I0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtl8cQ9D6I0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl8cQ9D6I0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl8cQ9D6I0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.26■□□□□ 0.99
Rtl8cQ9D6I0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.25■□□□□ 0.99
Rtl8cQ9D6I0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl8cQ9D6I0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.25■□□□□ 0.99
Rtl8cQ9D6I0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl8cQ9D6I0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl8cQ9D6I0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl8cQ9D6I0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtl8cQ9D6I0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtl8cQ9D6I0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtl8cQ9D6I0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtl8cQ9D6I0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl8cQ9D6I0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl8cQ9D6I0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtl8cQ9D6I0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtl8cQ9D6I0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rtl8cQ9D6I0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rtl8cQ9D6I0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtl8cQ9D6I0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtl8cQ9D6I0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Rtl8cQ9D6I0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtl8cQ9D6I0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rtl8cQ9D6I0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtl8cQ9D6I0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.17■□□□□ 0.98
Rtl8cQ9D6I0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtl8cQ9D6I0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rtl8cQ9D6I0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rtl8cQ9D6I0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtl8cQ9D6I0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtl8cQ9D6I0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rtl8cQ9D6I0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rtl8cQ9D6I0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rtl8cQ9D6I0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtl8cQ9D6I0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rtl8cQ9D6I0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.14■□□□□ 0.97
Rtl8cQ9D6I0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtl8cQ9D6I0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtl8cQ9D6I0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Rtl8cQ9D6I0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtl8cQ9D6I0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtl8cQ9D6I0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtl8cQ9D6I0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtl8cQ9D6I0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtl8cQ9D6I0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rtl8cQ9D6I0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rtl8cQ9D6I0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rtl8cQ9D6I0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rtl8cQ9D6I0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtl8cQ9D6I0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Rtl8cQ9D6I0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtl8cQ9D6I0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rtl8cQ9D6I0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rtl8cQ9D6I0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtl8cQ9D6I0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rtl8cQ9D6I0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtl8cQ9D6I0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtl8cQ9D6I0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtl8cQ9D6I0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rtl8cQ9D6I0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rtl8cQ9D6I0 Gm30023-201ENSMUST00000197970 889 ntBASIC21.08■□□□□ 0.97
Rtl8cQ9D6I0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rtl8cQ9D6I0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.07■□□□□ 0.96
Rtl8cQ9D6I0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rtl8cQ9D6I0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rtl8cQ9D6I0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rtl8cQ9D6I0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rtl8cQ9D6I0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rtl8cQ9D6I0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Rtl8cQ9D6I0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.04■□□□□ 0.96
Rtl8cQ9D6I0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rtl8cQ9D6I0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rtl8cQ9D6I0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rtl8cQ9D6I0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rtl8cQ9D6I0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rtl8cQ9D6I0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Rtl8cQ9D6I0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rtl8cQ9D6I0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Rtl8cQ9D6I0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rtl8cQ9D6I0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rtl8cQ9D6I0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rtl8cQ9D6I0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rtl8cQ9D6I0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms