Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf115Q9D0C1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf115Q9D0C1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf115Q9D0C1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf115Q9D0C1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.51■□□□□ 0.87
Rnf115Q9D0C1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf115Q9D0C1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf115Q9D0C1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf115Q9D0C1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf115Q9D0C1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.49■□□□□ 0.87
Rnf115Q9D0C1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.49■□□□□ 0.87
Rnf115Q9D0C1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf115Q9D0C1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf115Q9D0C1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf115Q9D0C1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf115Q9D0C1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf115Q9D0C1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf115Q9D0C1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf115Q9D0C1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rnf115Q9D0C1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rnf115Q9D0C1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf115Q9D0C1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf115Q9D0C1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.46■□□□□ 0.87
Rnf115Q9D0C1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf115Q9D0C1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf115Q9D0C1 Gm11175-201ENSMUST00000116172 543 ntBASIC20.44■□□□□ 0.86
Rnf115Q9D0C1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf115Q9D0C1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf115Q9D0C1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf115Q9D0C1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.42■□□□□ 0.86
Rnf115Q9D0C1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf115Q9D0C1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf115Q9D0C1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf115Q9D0C1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf115Q9D0C1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf115Q9D0C1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf115Q9D0C1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf115Q9D0C1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rnf115Q9D0C1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf115Q9D0C1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf115Q9D0C1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.36■□□□□ 0.85
Rnf115Q9D0C1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rnf115Q9D0C1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rnf115Q9D0C1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf115Q9D0C1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf115Q9D0C1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rnf115Q9D0C1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf115Q9D0C1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rnf115Q9D0C1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf115Q9D0C1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.33■□□□□ 0.84
Rnf115Q9D0C1 Cap2-205ENSMUST00000225824 1634 ntBASIC20.31■□□□□ 0.84
Rnf115Q9D0C1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf115Q9D0C1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf115Q9D0C1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf115Q9D0C1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf115Q9D0C1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf115Q9D0C1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.3■□□□□ 0.84
Rnf115Q9D0C1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf115Q9D0C1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf115Q9D0C1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf115Q9D0C1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf115Q9D0C1 Amer2-203ENSMUST00000225247 2662 ntBASIC20.29■□□□□ 0.84
Rnf115Q9D0C1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf115Q9D0C1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.29■□□□□ 0.84
Rnf115Q9D0C1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf115Q9D0C1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.28■□□□□ 0.84
Rnf115Q9D0C1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rnf115Q9D0C1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf115Q9D0C1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf115Q9D0C1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.26■□□□□ 0.83
Rnf115Q9D0C1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.26■□□□□ 0.83
Rnf115Q9D0C1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf115Q9D0C1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf115Q9D0C1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Rnf115Q9D0C1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf115Q9D0C1 Gm6311-201ENSMUST00000073790 878 ntBASIC20.25■□□□□ 0.83
Rnf115Q9D0C1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf115Q9D0C1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf115Q9D0C1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf115Q9D0C1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf115Q9D0C1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf115Q9D0C1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf115Q9D0C1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rnf115Q9D0C1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf115Q9D0C1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.23■□□□□ 0.83
Rnf115Q9D0C1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf115Q9D0C1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf115Q9D0C1 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.22■□□□□ 0.83
Rnf115Q9D0C1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.22■□□□□ 0.83
Rnf115Q9D0C1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf115Q9D0C1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf115Q9D0C1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.21■□□□□ 0.83
Rnf115Q9D0C1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf115Q9D0C1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Rnf115Q9D0C1 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.21■□□□□ 0.83
Rnf115Q9D0C1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf115Q9D0C1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf115Q9D0C1 Gm30023-201ENSMUST00000197970 889 ntBASIC20.2■□□□□ 0.82
Rnf115Q9D0C1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf115Q9D0C1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms