Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim13Q9CYB0 Gm24804-201ENSMUST00000174982 85 ntBASIC21.89■■□□□ 1.09
Trim13Q9CYB0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Trim13Q9CYB0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim13Q9CYB0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim13Q9CYB0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim13Q9CYB0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim13Q9CYB0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Trim13Q9CYB0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.87■■□□□ 1.09
Trim13Q9CYB0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trim13Q9CYB0 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.87■■□□□ 1.09
Trim13Q9CYB0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim13Q9CYB0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim13Q9CYB0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim13Q9CYB0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim13Q9CYB0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim13Q9CYB0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim13Q9CYB0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim13Q9CYB0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim13Q9CYB0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim13Q9CYB0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim13Q9CYB0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim13Q9CYB0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim13Q9CYB0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim13Q9CYB0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim13Q9CYB0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim13Q9CYB0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim13Q9CYB0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim13Q9CYB0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim13Q9CYB0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim13Q9CYB0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Trim13Q9CYB0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Trim13Q9CYB0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.8■■□□□ 1.08
Trim13Q9CYB0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim13Q9CYB0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim13Q9CYB0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim13Q9CYB0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim13Q9CYB0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim13Q9CYB0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Trim13Q9CYB0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim13Q9CYB0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim13Q9CYB0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim13Q9CYB0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.78■■□□□ 1.08
Trim13Q9CYB0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim13Q9CYB0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim13Q9CYB0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim13Q9CYB0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim13Q9CYB0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Trim13Q9CYB0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim13Q9CYB0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trim13Q9CYB0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim13Q9CYB0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim13Q9CYB0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim13Q9CYB0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim13Q9CYB0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim13Q9CYB0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim13Q9CYB0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.71■■□□□ 1.07
Trim13Q9CYB0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim13Q9CYB0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim13Q9CYB0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trim13Q9CYB0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim13Q9CYB0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim13Q9CYB0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim13Q9CYB0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim13Q9CYB0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim13Q9CYB0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim13Q9CYB0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim13Q9CYB0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim13Q9CYB0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim13Q9CYB0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim13Q9CYB0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim13Q9CYB0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim13Q9CYB0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim13Q9CYB0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim13Q9CYB0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim13Q9CYB0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.65■■□□□ 1.06
Trim13Q9CYB0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim13Q9CYB0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim13Q9CYB0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim13Q9CYB0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim13Q9CYB0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim13Q9CYB0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim13Q9CYB0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim13Q9CYB0 Gm16148-201ENSMUST00000119653 893 ntBASIC21.61■■□□□ 1.05
Trim13Q9CYB0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim13Q9CYB0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim13Q9CYB0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim13Q9CYB0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trim13Q9CYB0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim13Q9CYB0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.59■■□□□ 1.05
Trim13Q9CYB0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim13Q9CYB0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim13Q9CYB0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Trim13Q9CYB0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim13Q9CYB0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.58■■□□□ 1.04
Trim13Q9CYB0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim13Q9CYB0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim13Q9CYB0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim13Q9CYB0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim13Q9CYB0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms