Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pfdn1Q9CWM4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pfdn1Q9CWM4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pfdn1Q9CWM4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pfdn1Q9CWM4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.97■□□□□ 0.95
Pfdn1Q9CWM4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pfdn1Q9CWM4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pfdn1Q9CWM4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pfdn1Q9CWM4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pfdn1Q9CWM4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pfdn1Q9CWM4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pfdn1Q9CWM4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pfdn1Q9CWM4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.95■□□□□ 0.94
Pfdn1Q9CWM4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Pfdn1Q9CWM4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pfdn1Q9CWM4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pfdn1Q9CWM4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pfdn1Q9CWM4 Mipep-204ENSMUST00000225043 1548 ntBASIC20.94■□□□□ 0.94
Pfdn1Q9CWM4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.93■□□□□ 0.94
Pfdn1Q9CWM4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pfdn1Q9CWM4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pfdn1Q9CWM4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pfdn1Q9CWM4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pfdn1Q9CWM4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pfdn1Q9CWM4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pfdn1Q9CWM4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pfdn1Q9CWM4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pfdn1Q9CWM4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.9■□□□□ 0.94
Pfdn1Q9CWM4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pfdn1Q9CWM4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pfdn1Q9CWM4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pfdn1Q9CWM4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pfdn1Q9CWM4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pfdn1Q9CWM4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pfdn1Q9CWM4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pfdn1Q9CWM4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pfdn1Q9CWM4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pfdn1Q9CWM4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pfdn1Q9CWM4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pfdn1Q9CWM4 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.87■□□□□ 0.93
Pfdn1Q9CWM4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pfdn1Q9CWM4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pfdn1Q9CWM4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pfdn1Q9CWM4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Pfdn1Q9CWM4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pfdn1Q9CWM4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pfdn1Q9CWM4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pfdn1Q9CWM4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pfdn1Q9CWM4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pfdn1Q9CWM4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pfdn1Q9CWM4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pfdn1Q9CWM4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Pfdn1Q9CWM4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pfdn1Q9CWM4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pfdn1Q9CWM4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pfdn1Q9CWM4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pfdn1Q9CWM4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pfdn1Q9CWM4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pfdn1Q9CWM4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pfdn1Q9CWM4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pfdn1Q9CWM4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pfdn1Q9CWM4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pfdn1Q9CWM4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn1Q9CWM4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.79■□□□□ 0.92
Pfdn1Q9CWM4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.79■□□□□ 0.92
Pfdn1Q9CWM4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn1Q9CWM4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn1Q9CWM4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pfdn1Q9CWM4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn1Q9CWM4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn1Q9CWM4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn1Q9CWM4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn1Q9CWM4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn1Q9CWM4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn1Q9CWM4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn1Q9CWM4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pfdn1Q9CWM4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn1Q9CWM4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn1Q9CWM4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn1Q9CWM4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn1Q9CWM4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.74■□□□□ 0.91
Pfdn1Q9CWM4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn1Q9CWM4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn1Q9CWM4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn1Q9CWM4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn1Q9CWM4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn1Q9CWM4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn1Q9CWM4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Pfdn1Q9CWM4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pfdn1Q9CWM4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Pfdn1Q9CWM4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pfdn1Q9CWM4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.71■□□□□ 0.91
Pfdn1Q9CWM4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn1Q9CWM4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.7■□□□□ 0.9
Pfdn1Q9CWM4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pfdn1Q9CWM4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn1Q9CWM4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn1Q9CWM4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn1Q9CWM4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn1Q9CWM4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms