Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.24■■■□□ 2.59
Atxn3Q9CVD2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.24■■■□□ 2.59
Atxn3Q9CVD2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Atxn3Q9CVD2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Atxn3Q9CVD2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Atxn3Q9CVD2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Atxn3Q9CVD2 Nkain2-201ENSMUST00000092602 558 ntBASIC31.23■■■□□ 2.59
Atxn3Q9CVD2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Atxn3Q9CVD2 Gm30023-201ENSMUST00000197970 889 ntBASIC31.21■■■□□ 2.59
Atxn3Q9CVD2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Atxn3Q9CVD2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Atxn3Q9CVD2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
Atxn3Q9CVD2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC31.2■■■□□ 2.58
Atxn3Q9CVD2 Gm6821-201ENSMUST00000107540 542 ntBASIC31.17■■■□□ 2.58
Atxn3Q9CVD2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Atxn3Q9CVD2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Atxn3Q9CVD2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Atxn3Q9CVD2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Atxn3Q9CVD2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.15■■■□□ 2.58
Atxn3Q9CVD2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Atxn3Q9CVD2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Atxn3Q9CVD2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Atxn3Q9CVD2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Atxn3Q9CVD2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.57
Atxn3Q9CVD2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
Atxn3Q9CVD2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Atxn3Q9CVD2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.12■■■□□ 2.57
Atxn3Q9CVD2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Atxn3Q9CVD2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Atxn3Q9CVD2 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.12■■■□□ 2.57
Atxn3Q9CVD2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.11■■■□□ 2.57
Atxn3Q9CVD2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Atxn3Q9CVD2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Atxn3Q9CVD2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Atxn3Q9CVD2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Atxn3Q9CVD2 Gm8503-201ENSMUST00000118131 455 ntBASIC31.09■■■□□ 2.57
Atxn3Q9CVD2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Atxn3Q9CVD2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
Atxn3Q9CVD2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.08■■■□□ 2.57
Atxn3Q9CVD2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Atxn3Q9CVD2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Atxn3Q9CVD2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Atxn3Q9CVD2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Atxn3Q9CVD2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Atxn3Q9CVD2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
Atxn3Q9CVD2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.04■■■□□ 2.56
Atxn3Q9CVD2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Atxn3Q9CVD2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Atxn3Q9CVD2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Atxn3Q9CVD2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Atxn3Q9CVD2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Atxn3Q9CVD2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Atxn3Q9CVD2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Atxn3Q9CVD2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Atxn3Q9CVD2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.01■■■□□ 2.55
Atxn3Q9CVD2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.01■■■□□ 2.55
Atxn3Q9CVD2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31■■■□□ 2.55
Atxn3Q9CVD2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Atxn3Q9CVD2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Atxn3Q9CVD2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.98■■■□□ 2.55
Atxn3Q9CVD2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Atxn3Q9CVD2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Atxn3Q9CVD2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Atxn3Q9CVD2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Atxn3Q9CVD2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Atxn3Q9CVD2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Atxn3Q9CVD2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
Atxn3Q9CVD2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Atxn3Q9CVD2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Atxn3Q9CVD2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Atxn3Q9CVD2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Atxn3Q9CVD2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Atxn3Q9CVD2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Atxn3Q9CVD2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30.91■■■□□ 2.54
Atxn3Q9CVD2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Atxn3Q9CVD2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.9■■■□□ 2.54
Atxn3Q9CVD2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Atxn3Q9CVD2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Atxn3Q9CVD2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.88■■■□□ 2.53
Atxn3Q9CVD2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Atxn3Q9CVD2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
Atxn3Q9CVD2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Atxn3Q9CVD2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Atxn3Q9CVD2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.86■■■□□ 2.53
Atxn3Q9CVD2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Atxn3Q9CVD2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Atxn3Q9CVD2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Atxn3Q9CVD2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Atxn3Q9CVD2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.83■■■□□ 2.53
Atxn3Q9CVD2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Atxn3Q9CVD2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Atxn3Q9CVD2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Atxn3Q9CVD2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Atxn3Q9CVD2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.78■■■□□ 2.52
Atxn3Q9CVD2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.77■■■□□ 2.52
Atxn3Q9CVD2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Atxn3Q9CVD2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Atxn3Q9CVD2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Atxn3Q9CVD2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Atxn3Q9CVD2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms