Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.44■□□□□ 0.7
Rer1Q9CQU3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Rer1Q9CQU3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rer1Q9CQU3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rer1Q9CQU3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.44■□□□□ 0.7
Rer1Q9CQU3 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.44■□□□□ 0.7
Rer1Q9CQU3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rer1Q9CQU3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rer1Q9CQU3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rer1Q9CQU3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rer1Q9CQU3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.42■□□□□ 0.7
Rer1Q9CQU3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.42■□□□□ 0.7
Rer1Q9CQU3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rer1Q9CQU3 Gm9397-201ENSMUST00000200125 605 ntBASIC19.41■□□□□ 0.7
Rer1Q9CQU3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.41■□□□□ 0.7
Rer1Q9CQU3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rer1Q9CQU3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rer1Q9CQU3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.4■□□□□ 0.7
Rer1Q9CQU3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rer1Q9CQU3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.4■□□□□ 0.7
Rer1Q9CQU3 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.39■□□□□ 0.69
Rer1Q9CQU3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rer1Q9CQU3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rer1Q9CQU3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rer1Q9CQU3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rer1Q9CQU3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rer1Q9CQU3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rer1Q9CQU3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rer1Q9CQU3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rer1Q9CQU3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Rer1Q9CQU3 Gm24970-201ENSMUST00000175582 82 ntBASIC19.35■□□□□ 0.69
Rer1Q9CQU3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rer1Q9CQU3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rer1Q9CQU3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rer1Q9CQU3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rer1Q9CQU3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.34■□□□□ 0.69
Rer1Q9CQU3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.34■□□□□ 0.69
Rer1Q9CQU3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rer1Q9CQU3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rer1Q9CQU3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rer1Q9CQU3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rer1Q9CQU3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.33■□□□□ 0.68
Rer1Q9CQU3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.33■□□□□ 0.68
Rer1Q9CQU3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Rer1Q9CQU3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.32■□□□□ 0.68
Rer1Q9CQU3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rer1Q9CQU3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.32■□□□□ 0.68
Rer1Q9CQU3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rer1Q9CQU3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.32■□□□□ 0.68
Rer1Q9CQU3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rer1Q9CQU3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rer1Q9CQU3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rer1Q9CQU3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rer1Q9CQU3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rer1Q9CQU3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rer1Q9CQU3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rer1Q9CQU3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.31■□□□□ 0.68
Rer1Q9CQU3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rer1Q9CQU3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rer1Q9CQU3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rer1Q9CQU3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rer1Q9CQU3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rer1Q9CQU3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rer1Q9CQU3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rer1Q9CQU3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rer1Q9CQU3 Gm45855-201ENSMUST00000212546 880 ntBASIC19.29■□□□□ 0.68
Rer1Q9CQU3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rer1Q9CQU3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Rer1Q9CQU3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rer1Q9CQU3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Rer1Q9CQU3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rer1Q9CQU3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Rer1Q9CQU3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rer1Q9CQU3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.28■□□□□ 0.68
Rer1Q9CQU3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rer1Q9CQU3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rer1Q9CQU3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rer1Q9CQU3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rer1Q9CQU3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rer1Q9CQU3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rer1Q9CQU3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rer1Q9CQU3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rer1Q9CQU3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rer1Q9CQU3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rer1Q9CQU3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Rer1Q9CQU3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rer1Q9CQU3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rer1Q9CQU3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rer1Q9CQU3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rer1Q9CQU3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rer1Q9CQU3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rer1Q9CQU3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rer1Q9CQU3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rer1Q9CQU3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rer1Q9CQU3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rer1Q9CQU3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rer1Q9CQU3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rer1Q9CQU3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rer1Q9CQU3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rer1Q9CQU3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms