Protein–RNA interactions for Protein: Q99L60

Atp6v1c2, V-type proton ATPase subunit C 2, mousemouse

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c2Q99L60 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1c2Q99L60 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1c2Q99L60 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1c2Q99L60 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1c2Q99L60 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1c2Q99L60 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1c2Q99L60 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.45■■□□□ 1.18
Atp6v1c2Q99L60 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1c2Q99L60 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1c2Q99L60 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1c2Q99L60 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1c2Q99L60 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1c2Q99L60 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1c2Q99L60 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.42■■□□□ 1.18
Atp6v1c2Q99L60 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1c2Q99L60 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1c2Q99L60 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.4■■□□□ 1.18
Atp6v1c2Q99L60 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Atp6v1c2Q99L60 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Atp6v1c2Q99L60 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Atp6v1c2Q99L60 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Atp6v1c2Q99L60 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Atp6v1c2Q99L60 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1c2Q99L60 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1c2Q99L60 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1c2Q99L60 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atp6v1c2Q99L60 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Atp6v1c2Q99L60 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Atp6v1c2Q99L60 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1c2Q99L60 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1c2Q99L60 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1c2Q99L60 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.35■■□□□ 1.17
Atp6v1c2Q99L60 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1c2Q99L60 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1c2Q99L60 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1c2Q99L60 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1c2Q99L60 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1c2Q99L60 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Atp6v1c2Q99L60 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Atp6v1c2Q99L60 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Atp6v1c2Q99L60 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1c2Q99L60 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1c2Q99L60 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Atp6v1c2Q99L60 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Atp6v1c2Q99L60 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atp6v1c2Q99L60 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atp6v1c2Q99L60 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Atp6v1c2Q99L60 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atp6v1c2Q99L60 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atp6v1c2Q99L60 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1c2Q99L60 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1c2Q99L60 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atp6v1c2Q99L60 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Atp6v1c2Q99L60 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atp6v1c2Q99L60 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1c2Q99L60 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1c2Q99L60 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1c2Q99L60 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1c2Q99L60 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1c2Q99L60 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1c2Q99L60 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.26■■□□□ 1.15
Atp6v1c2Q99L60 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Atp6v1c2Q99L60 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.25■■□□□ 1.15
Atp6v1c2Q99L60 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1c2Q99L60 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.24■■□□□ 1.15
Atp6v1c2Q99L60 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Atp6v1c2Q99L60 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1c2Q99L60 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1c2Q99L60 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1c2Q99L60 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Atp6v1c2Q99L60 Zfp131-205ENSMUST00000223812 663 ntBASIC22.23■■□□□ 1.15
Atp6v1c2Q99L60 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atp6v1c2Q99L60 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atp6v1c2Q99L60 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atp6v1c2Q99L60 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Atp6v1c2Q99L60 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1c2Q99L60 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1c2Q99L60 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1c2Q99L60 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1c2Q99L60 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Atp6v1c2Q99L60 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atp6v1c2Q99L60 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Atp6v1c2Q99L60 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atp6v1c2Q99L60 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atp6v1c2Q99L60 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atp6v1c2Q99L60 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atp6v1c2Q99L60 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Atp6v1c2Q99L60 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Atp6v1c2Q99L60 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
Atp6v1c2Q99L60 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1c2Q99L60 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1c2Q99L60 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1c2Q99L60 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1c2Q99L60 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.17■■□□□ 1.14
Atp6v1c2Q99L60 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1c2Q99L60 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Atp6v1c2Q99L60 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1c2Q99L60 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Atp6v1c2Q99L60 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1c2Q99L60 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms