Protein–RNA interactions for Protein: Q99K95

Rtfdc1, Protein RTF2 homolog, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1Q99K95 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rtfdc1Q99K95 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Rtfdc1Q99K95 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.45■■□□□ 1.82
Rtfdc1Q99K95 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.45■■□□□ 1.82
Rtfdc1Q99K95 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rtfdc1Q99K95 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rtfdc1Q99K95 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rtfdc1Q99K95 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rtfdc1Q99K95 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Rtfdc1Q99K95 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rtfdc1Q99K95 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rtfdc1Q99K95 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rtfdc1Q99K95 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rtfdc1Q99K95 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rtfdc1Q99K95 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtfdc1Q99K95 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtfdc1Q99K95 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.38■■□□□ 1.81
Rtfdc1Q99K95 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtfdc1Q99K95 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Rtfdc1Q99K95 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtfdc1Q99K95 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rtfdc1Q99K95 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rtfdc1Q99K95 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rtfdc1Q99K95 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Rtfdc1Q99K95 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rtfdc1Q99K95 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rtfdc1Q99K95 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rtfdc1Q99K95 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rtfdc1Q99K95 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.3■■□□□ 1.8
Rtfdc1Q99K95 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Rtfdc1Q99K95 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rtfdc1Q99K95 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.29■■□□□ 1.8
Rtfdc1Q99K95 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Rtfdc1Q99K95 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rtfdc1Q99K95 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Rtfdc1Q99K95 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.27■■□□□ 1.8
Rtfdc1Q99K95 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.25■■□□□ 1.79
Rtfdc1Q99K95 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rtfdc1Q99K95 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rtfdc1Q99K95 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rtfdc1Q99K95 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rtfdc1Q99K95 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rtfdc1Q99K95 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtfdc1Q99K95 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.22■■□□□ 1.79
Rtfdc1Q99K95 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.22■■□□□ 1.79
Rtfdc1Q99K95 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rtfdc1Q99K95 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtfdc1Q99K95 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.21■■□□□ 1.79
Rtfdc1Q99K95 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.21■■□□□ 1.79
Rtfdc1Q99K95 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.21■■□□□ 1.79
Rtfdc1Q99K95 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtfdc1Q99K95 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Rtfdc1Q99K95 Particl-201ENSMUST00000205370 1560 ntBASIC26.2■■□□□ 1.79
Rtfdc1Q99K95 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Rtfdc1Q99K95 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.2■■□□□ 1.78
Rtfdc1Q99K95 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Rtfdc1Q99K95 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rtfdc1Q99K95 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rtfdc1Q99K95 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Rtfdc1Q99K95 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.16■■□□□ 1.78
Rtfdc1Q99K95 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.15■■□□□ 1.78
Rtfdc1Q99K95 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rtfdc1Q99K95 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rtfdc1Q99K95 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.15■■□□□ 1.78
Rtfdc1Q99K95 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rtfdc1Q99K95 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rtfdc1Q99K95 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rtfdc1Q99K95 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rtfdc1Q99K95 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rtfdc1Q99K95 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Rtfdc1Q99K95 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.12■■□□□ 1.77
Rtfdc1Q99K95 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rtfdc1Q99K95 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Rtfdc1Q99K95 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rtfdc1Q99K95 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rtfdc1Q99K95 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rtfdc1Q99K95 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rtfdc1Q99K95 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Rtfdc1Q99K95 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.08■■□□□ 1.77
Rtfdc1Q99K95 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rtfdc1Q99K95 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rtfdc1Q99K95 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rtfdc1Q99K95 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
Rtfdc1Q99K95 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rtfdc1Q99K95 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rtfdc1Q99K95 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rtfdc1Q99K95 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rtfdc1Q99K95 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.03■■□□□ 1.76
Rtfdc1Q99K95 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.03■■□□□ 1.76
Rtfdc1Q99K95 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rtfdc1Q99K95 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Rtfdc1Q99K95 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rtfdc1Q99K95 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Rtfdc1Q99K95 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Rtfdc1Q99K95 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rtfdc1Q99K95 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rtfdc1Q99K95 Gm11175-201ENSMUST00000116172 543 ntBASIC26.01■■□□□ 1.75
Rtfdc1Q99K95 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Rtfdc1Q99K95 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.01■■□□□ 1.75
Rtfdc1Q99K95 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 281.8 ms