Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.63■■□□□ 1.37
Pcdhb4Q91XZ6 Gm9397-201ENSMUST00000200125 605 ntBASIC23.63■■□□□ 1.37
Pcdhb4Q91XZ6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb4Q91XZ6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb4Q91XZ6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb4Q91XZ6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb4Q91XZ6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb4Q91XZ6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.62■■□□□ 1.37
Pcdhb4Q91XZ6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb4Q91XZ6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb4Q91XZ6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb4Q91XZ6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb4Q91XZ6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.6■■□□□ 1.37
Pcdhb4Q91XZ6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Pcdhb4Q91XZ6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.59■■□□□ 1.37
Pcdhb4Q91XZ6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb4Q91XZ6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb4Q91XZ6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb4Q91XZ6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.58■■□□□ 1.37
Pcdhb4Q91XZ6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb4Q91XZ6 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.57■■□□□ 1.36
Pcdhb4Q91XZ6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.57■■□□□ 1.36
Pcdhb4Q91XZ6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb4Q91XZ6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb4Q91XZ6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.56■■□□□ 1.36
Pcdhb4Q91XZ6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Pcdhb4Q91XZ6 Gm24970-201ENSMUST00000175582 82 ntBASIC23.55■■□□□ 1.36
Pcdhb4Q91XZ6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb4Q91XZ6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Pcdhb4Q91XZ6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhb4Q91XZ6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb4Q91XZ6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb4Q91XZ6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb4Q91XZ6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Pcdhb4Q91XZ6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb4Q91XZ6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb4Q91XZ6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.49■■□□□ 1.35
Pcdhb4Q91XZ6 Gm45855-201ENSMUST00000212546 880 ntBASIC23.49■■□□□ 1.35
Pcdhb4Q91XZ6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.49■■□□□ 1.35
Pcdhb4Q91XZ6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb4Q91XZ6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb4Q91XZ6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Pcdhb4Q91XZ6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb4Q91XZ6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb4Q91XZ6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Pcdhb4Q91XZ6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Pcdhb4Q91XZ6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb4Q91XZ6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb4Q91XZ6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb4Q91XZ6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb4Q91XZ6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.43■■□□□ 1.34
Pcdhb4Q91XZ6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.43■■□□□ 1.34
Pcdhb4Q91XZ6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.43■■□□□ 1.34
Pcdhb4Q91XZ6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb4Q91XZ6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb4Q91XZ6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.42■■□□□ 1.34
Pcdhb4Q91XZ6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb4Q91XZ6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb4Q91XZ6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb4Q91XZ6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb4Q91XZ6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdhb4Q91XZ6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Pcdhb4Q91XZ6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb4Q91XZ6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb4Q91XZ6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb4Q91XZ6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb4Q91XZ6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb4Q91XZ6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Pcdhb4Q91XZ6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.36■■□□□ 1.33
Pcdhb4Q91XZ6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb4Q91XZ6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.36■■□□□ 1.33
Pcdhb4Q91XZ6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb4Q91XZ6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb4Q91XZ6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Pcdhb4Q91XZ6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb4Q91XZ6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Pcdhb4Q91XZ6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb4Q91XZ6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb4Q91XZ6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb4Q91XZ6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb4Q91XZ6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb4Q91XZ6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb4Q91XZ6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb4Q91XZ6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Pcdhb4Q91XZ6 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.31■■□□□ 1.32
Pcdhb4Q91XZ6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb4Q91XZ6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb4Q91XZ6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb4Q91XZ6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb4Q91XZ6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb4Q91XZ6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb4Q91XZ6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb4Q91XZ6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb4Q91XZ6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb4Q91XZ6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb4Q91XZ6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb4Q91XZ6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb4Q91XZ6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb4Q91XZ6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb4Q91XZ6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms