Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga3Q91XY5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga3Q91XY5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga3Q91XY5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhga3Q91XY5 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.06■□□□□ 0.96
Pcdhga3Q91XY5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga3Q91XY5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdhga3Q91XY5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga3Q91XY5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhga3Q91XY5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga3Q91XY5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga3Q91XY5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga3Q91XY5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga3Q91XY5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga3Q91XY5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhga3Q91XY5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga3Q91XY5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhga3Q91XY5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhga3Q91XY5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhga3Q91XY5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga3Q91XY5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga3Q91XY5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga3Q91XY5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga3Q91XY5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.99■□□□□ 0.95
Pcdhga3Q91XY5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga3Q91XY5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga3Q91XY5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga3Q91XY5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga3Q91XY5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhga3Q91XY5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga3Q91XY5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga3Q91XY5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga3Q91XY5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga3Q91XY5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhga3Q91XY5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhga3Q91XY5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhga3Q91XY5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga3Q91XY5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga3Q91XY5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga3Q91XY5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhga3Q91XY5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga3Q91XY5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhga3Q91XY5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhga3Q91XY5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Pcdhga3Q91XY5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhga3Q91XY5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga3Q91XY5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga3Q91XY5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhga3Q91XY5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga3Q91XY5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhga3Q91XY5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhga3Q91XY5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhga3Q91XY5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhga3Q91XY5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhga3Q91XY5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhga3Q91XY5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhga3Q91XY5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhga3Q91XY5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhga3Q91XY5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhga3Q91XY5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhga3Q91XY5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhga3Q91XY5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhga3Q91XY5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhga3Q91XY5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Pcdhga3Q91XY5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhga3Q91XY5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga3Q91XY5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.82■□□□□ 0.92
Pcdhga3Q91XY5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcdhga3Q91XY5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga3Q91XY5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhga3Q91XY5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhga3Q91XY5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhga3Q91XY5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.81■□□□□ 0.92
Pcdhga3Q91XY5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhga3Q91XY5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.81■□□□□ 0.92
Pcdhga3Q91XY5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhga3Q91XY5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.8■□□□□ 0.92
Pcdhga3Q91XY5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhga3Q91XY5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhga3Q91XY5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhga3Q91XY5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga3Q91XY5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga3Q91XY5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.78■□□□□ 0.92
Pcdhga3Q91XY5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhga3Q91XY5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhga3Q91XY5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga3Q91XY5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhga3Q91XY5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga3Q91XY5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhga3Q91XY5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga3Q91XY5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhga3Q91XY5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga3Q91XY5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga3Q91XY5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga3Q91XY5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga3Q91XY5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga3Q91XY5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga3Q91XY5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga3Q91XY5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga3Q91XY5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 303.5 ms