Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
Pcdhgb4Q91XX6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.31■■□□□ 1.64
Pcdhgb4Q91XX6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Pcdhgb4Q91XX6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhgb4Q91XX6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.3■■□□□ 1.64
Pcdhgb4Q91XX6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhgb4Q91XX6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Pcdhgb4Q91XX6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhgb4Q91XX6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhgb4Q91XX6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Pcdhgb4Q91XX6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhgb4Q91XX6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhgb4Q91XX6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Pcdhgb4Q91XX6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhgb4Q91XX6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhgb4Q91XX6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhgb4Q91XX6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.24■■□□□ 1.63
Pcdhgb4Q91XX6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhgb4Q91XX6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgb4Q91XX6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Pcdhgb4Q91XX6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgb4Q91XX6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgb4Q91XX6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.22■■□□□ 1.63
Pcdhgb4Q91XX6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhgb4Q91XX6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Pcdhgb4Q91XX6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhgb4Q91XX6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhgb4Q91XX6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Pcdhgb4Q91XX6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhgb4Q91XX6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhgb4Q91XX6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhgb4Q91XX6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhgb4Q91XX6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Pcdhgb4Q91XX6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhgb4Q91XX6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhgb4Q91XX6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhgb4Q91XX6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhgb4Q91XX6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhgb4Q91XX6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhgb4Q91XX6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Pcdhgb4Q91XX6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.16■■□□□ 1.62
Pcdhgb4Q91XX6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhgb4Q91XX6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhgb4Q91XX6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.15■■□□□ 1.62
Pcdhgb4Q91XX6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhgb4Q91XX6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.14■■□□□ 1.62
Pcdhgb4Q91XX6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhgb4Q91XX6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.14■■□□□ 1.61
Pcdhgb4Q91XX6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhgb4Q91XX6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.13■■□□□ 1.61
Pcdhgb4Q91XX6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
Pcdhgb4Q91XX6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhgb4Q91XX6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgb4Q91XX6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
Pcdhgb4Q91XX6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Pcdhgb4Q91XX6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhgb4Q91XX6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhgb4Q91XX6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhgb4Q91XX6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhgb4Q91XX6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhgb4Q91XX6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Pcdhgb4Q91XX6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhgb4Q91XX6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhgb4Q91XX6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Pcdhgb4Q91XX6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgb4Q91XX6 Gm30023-201ENSMUST00000197970 889 ntBASIC25.06■■□□□ 1.6
Pcdhgb4Q91XX6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Pcdhgb4Q91XX6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhgb4Q91XX6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgb4Q91XX6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgb4Q91XX6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgb4Q91XX6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgb4Q91XX6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Pcdhgb4Q91XX6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.05■■□□□ 1.6
Pcdhgb4Q91XX6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Pcdhgb4Q91XX6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgb4Q91XX6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgb4Q91XX6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhgb4Q91XX6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhgb4Q91XX6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhgb4Q91XX6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhgb4Q91XX6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgb4Q91XX6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Pcdhgb4Q91XX6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgb4Q91XX6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhgb4Q91XX6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhgb4Q91XX6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhgb4Q91XX6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25■■□□□ 1.59
Pcdhgb4Q91XX6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.99■■□□□ 1.59
Pcdhgb4Q91XX6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.99■■□□□ 1.59
Pcdhgb4Q91XX6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhgb4Q91XX6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhgb4Q91XX6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Pcdhgb4Q91XX6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Pcdhgb4Q91XX6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhgb4Q91XX6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhgb4Q91XX6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Pcdhgb4Q91XX6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhgb4Q91XX6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdhgb4Q91XX6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms