Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdhgc5Q91XW9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC27.34■■□□□ 1.97
Pcdhgc5Q91XW9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Pcdhgc5Q91XW9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdhgc5Q91XW9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Pcdhgc5Q91XW9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdhgc5Q91XW9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
Pcdhgc5Q91XW9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhgc5Q91XW9 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.32■■□□□ 1.96
Pcdhgc5Q91XW9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdhgc5Q91XW9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Pcdhgc5Q91XW9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.3■■□□□ 1.96
Pcdhgc5Q91XW9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdhgc5Q91XW9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.3■■□□□ 1.96
Pcdhgc5Q91XW9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pcdhgc5Q91XW9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.29■■□□□ 1.96
Pcdhgc5Q91XW9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pcdhgc5Q91XW9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdhgc5Q91XW9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Pcdhgc5Q91XW9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdhgc5Q91XW9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pcdhgc5Q91XW9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Pcdhgc5Q91XW9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.27■■□□□ 1.96
Pcdhgc5Q91XW9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.26■■□□□ 1.96
Pcdhgc5Q91XW9 Cap2-205ENSMUST00000225824 1634 ntBASIC27.26■■□□□ 1.95
Pcdhgc5Q91XW9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.26■■□□□ 1.95
Pcdhgc5Q91XW9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Pcdhgc5Q91XW9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.25■■□□□ 1.95
Pcdhgc5Q91XW9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.24■■□□□ 1.95
Pcdhgc5Q91XW9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.23■■□□□ 1.95
Pcdhgc5Q91XW9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdhgc5Q91XW9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhgc5Q91XW9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.21■■□□□ 1.95
Pcdhgc5Q91XW9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhgc5Q91XW9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Pcdhgc5Q91XW9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdhgc5Q91XW9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdhgc5Q91XW9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdhgc5Q91XW9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Pcdhgc5Q91XW9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhgc5Q91XW9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhgc5Q91XW9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhgc5Q91XW9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhgc5Q91XW9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhgc5Q91XW9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdhgc5Q91XW9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdhgc5Q91XW9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdhgc5Q91XW9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdhgc5Q91XW9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdhgc5Q91XW9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdhgc5Q91XW9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Pcdhgc5Q91XW9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Pcdhgc5Q91XW9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Pcdhgc5Q91XW9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhgc5Q91XW9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhgc5Q91XW9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdhgc5Q91XW9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.1■■□□□ 1.93
Pcdhgc5Q91XW9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdhgc5Q91XW9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhgc5Q91XW9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhgc5Q91XW9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhgc5Q91XW9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhgc5Q91XW9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhgc5Q91XW9 Gm6311-201ENSMUST00000073790 878 ntBASIC27.06■■□□□ 1.92
Pcdhgc5Q91XW9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhgc5Q91XW9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhgc5Q91XW9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.05■■□□□ 1.92
Pcdhgc5Q91XW9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.04■■□□□ 1.92
Pcdhgc5Q91XW9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdhgc5Q91XW9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Pcdhgc5Q91XW9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Pcdhgc5Q91XW9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdhgc5Q91XW9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdhgc5Q91XW9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
Pcdhgc5Q91XW9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdhgc5Q91XW9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdhgc5Q91XW9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Pcdhgc5Q91XW9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Pcdhgc5Q91XW9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdhgc5Q91XW9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
Pcdhgc5Q91XW9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdhgc5Q91XW9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdhgc5Q91XW9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhgc5Q91XW9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhgc5Q91XW9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.97■■□□□ 1.91
Pcdhgc5Q91XW9 Amer2-203ENSMUST00000225247 2662 ntBASIC26.97■■□□□ 1.91
Pcdhgc5Q91XW9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.97■■□□□ 1.91
Pcdhgc5Q91XW9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.97■■□□□ 1.91
Pcdhgc5Q91XW9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
Pcdhgc5Q91XW9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdhgc5Q91XW9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.96■■□□□ 1.91
Pcdhgc5Q91XW9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.96■■□□□ 1.91
Pcdhgc5Q91XW9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdhgc5Q91XW9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.96■■□□□ 1.91
Pcdhgc5Q91XW9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Pcdhgc5Q91XW9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdhgc5Q91XW9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdhgc5Q91XW9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhgc5Q91XW9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhgc5Q91XW9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.94■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms