Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tram1Q91V04 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tram1Q91V04 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tram1Q91V04 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.44■□□□□ 0.86
Tram1Q91V04 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tram1Q91V04 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Tram1Q91V04 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Tram1Q91V04 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tram1Q91V04 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tram1Q91V04 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tram1Q91V04 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tram1Q91V04 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tram1Q91V04 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tram1Q91V04 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Tram1Q91V04 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tram1Q91V04 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tram1Q91V04 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tram1Q91V04 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tram1Q91V04 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tram1Q91V04 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tram1Q91V04 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.39■□□□□ 0.86
Tram1Q91V04 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tram1Q91V04 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tram1Q91V04 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Tram1Q91V04 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tram1Q91V04 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tram1Q91V04 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tram1Q91V04 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tram1Q91V04 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Tram1Q91V04 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tram1Q91V04 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tram1Q91V04 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tram1Q91V04 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tram1Q91V04 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tram1Q91V04 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tram1Q91V04 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tram1Q91V04 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tram1Q91V04 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.36■□□□□ 0.85
Tram1Q91V04 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.35■□□□□ 0.85
Tram1Q91V04 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tram1Q91V04 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tram1Q91V04 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.35■□□□□ 0.85
Tram1Q91V04 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tram1Q91V04 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tram1Q91V04 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tram1Q91V04 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tram1Q91V04 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tram1Q91V04 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tram1Q91V04 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tram1Q91V04 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tram1Q91V04 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tram1Q91V04 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tram1Q91V04 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tram1Q91V04 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tram1Q91V04 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tram1Q91V04 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tram1Q91V04 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tram1Q91V04 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tram1Q91V04 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tram1Q91V04 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tram1Q91V04 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tram1Q91V04 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tram1Q91V04 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tram1Q91V04 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tram1Q91V04 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tram1Q91V04 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tram1Q91V04 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tram1Q91V04 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tram1Q91V04 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tram1Q91V04 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Tram1Q91V04 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tram1Q91V04 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tram1Q91V04 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.26■□□□□ 0.83
Tram1Q91V04 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tram1Q91V04 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tram1Q91V04 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.24■□□□□ 0.83
Tram1Q91V04 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tram1Q91V04 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tram1Q91V04 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tram1Q91V04 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tram1Q91V04 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.23■□□□□ 0.83
Tram1Q91V04 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1Q91V04 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1Q91V04 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1Q91V04 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1Q91V04 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1Q91V04 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1Q91V04 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1Q91V04 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1Q91V04 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
Tram1Q91V04 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1Q91V04 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1Q91V04 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1Q91V04 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1Q91V04 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1Q91V04 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tram1Q91V04 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Tram1Q91V04 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tram1Q91V04 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tram1Q91V04 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms