Protein–RNA interactions for Protein: Q8VHT7

Gtf3a, Transcription factor IIIA, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3aQ8VHT7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3aQ8VHT7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3aQ8VHT7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3aQ8VHT7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3aQ8VHT7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3aQ8VHT7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.71■□□□□ 0.91
Gtf3aQ8VHT7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3aQ8VHT7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3aQ8VHT7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf3aQ8VHT7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf3aQ8VHT7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Gtf3aQ8VHT7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Gtf3aQ8VHT7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3aQ8VHT7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
Gtf3aQ8VHT7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gtf3aQ8VHT7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.66■□□□□ 0.9
Gtf3aQ8VHT7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3aQ8VHT7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.65■□□□□ 0.9
Gtf3aQ8VHT7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.64■□□□□ 0.9
Gtf3aQ8VHT7 Gm30023-201ENSMUST00000197970 889 ntBASIC20.64■□□□□ 0.89
Gtf3aQ8VHT7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf3aQ8VHT7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.64■□□□□ 0.89
Gtf3aQ8VHT7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf3aQ8VHT7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf3aQ8VHT7 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.63■□□□□ 0.89
Gtf3aQ8VHT7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Gtf3aQ8VHT7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf3aQ8VHT7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf3aQ8VHT7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.62■□□□□ 0.89
Gtf3aQ8VHT7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf3aQ8VHT7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf3aQ8VHT7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Gtf3aQ8VHT7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf3aQ8VHT7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Gtf3aQ8VHT7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3aQ8VHT7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.59■□□□□ 0.89
Gtf3aQ8VHT7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3aQ8VHT7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3aQ8VHT7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3aQ8VHT7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.59■□□□□ 0.89
Gtf3aQ8VHT7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gtf3aQ8VHT7 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.58■□□□□ 0.89
Gtf3aQ8VHT7 Amer2-203ENSMUST00000225247 2662 ntBASIC20.58■□□□□ 0.89
Gtf3aQ8VHT7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gtf3aQ8VHT7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gtf3aQ8VHT7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.57■□□□□ 0.88
Gtf3aQ8VHT7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gtf3aQ8VHT7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3aQ8VHT7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3aQ8VHT7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.56■□□□□ 0.88
Gtf3aQ8VHT7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Gtf3aQ8VHT7 Gm7432-201ENSMUST00000210343 879 ntBASIC20.54■□□□□ 0.88
Gtf3aQ8VHT7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.54■□□□□ 0.88
Gtf3aQ8VHT7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gtf3aQ8VHT7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gtf3aQ8VHT7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gtf3aQ8VHT7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gtf3aQ8VHT7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Gtf3aQ8VHT7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gtf3aQ8VHT7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gtf3aQ8VHT7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Gtf3aQ8VHT7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gtf3aQ8VHT7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gtf3aQ8VHT7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gtf3aQ8VHT7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gtf3aQ8VHT7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gtf3aQ8VHT7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.49■□□□□ 0.87
Gtf3aQ8VHT7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gtf3aQ8VHT7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gtf3aQ8VHT7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gtf3aQ8VHT7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gtf3aQ8VHT7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gtf3aQ8VHT7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gtf3aQ8VHT7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gtf3aQ8VHT7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf3aQ8VHT7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.46■□□□□ 0.87
Gtf3aQ8VHT7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf3aQ8VHT7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf3aQ8VHT7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Gtf3aQ8VHT7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf3aQ8VHT7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
Gtf3aQ8VHT7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf3aQ8VHT7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3aQ8VHT7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3aQ8VHT7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf3aQ8VHT7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Gtf3aQ8VHT7 Gm11599-201ENSMUST00000118720 878 ntBASIC20.44■□□□□ 0.86
Gtf3aQ8VHT7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf3aQ8VHT7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.43■□□□□ 0.86
Gtf3aQ8VHT7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.43■□□□□ 0.86
Gtf3aQ8VHT7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf3aQ8VHT7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf3aQ8VHT7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3aQ8VHT7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3aQ8VHT7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3aQ8VHT7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3aQ8VHT7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf3aQ8VHT7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf3aQ8VHT7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.4■□□□□ 0.86
Gtf3aQ8VHT7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms