Protein–RNA interactions for Protein: Q8VHF2

Cdhr5, Cadherin-related family member 5, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr5Q8VHF2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdhr5Q8VHF2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdhr5Q8VHF2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdhr5Q8VHF2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdhr5Q8VHF2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cdhr5Q8VHF2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdhr5Q8VHF2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdhr5Q8VHF2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr5Q8VHF2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr5Q8VHF2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr5Q8VHF2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Cdhr5Q8VHF2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.25■■□□□ 1.15
Cdhr5Q8VHF2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Cdhr5Q8VHF2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr5Q8VHF2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr5Q8VHF2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.24■■□□□ 1.15
Cdhr5Q8VHF2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr5Q8VHF2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr5Q8VHF2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdhr5Q8VHF2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Cdhr5Q8VHF2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cdhr5Q8VHF2 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.21■■□□□ 1.15
Cdhr5Q8VHF2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Cdhr5Q8VHF2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.21■■□□□ 1.15
Cdhr5Q8VHF2 Zfp131-205ENSMUST00000223812 663 ntBASIC22.21■■□□□ 1.15
Cdhr5Q8VHF2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr5Q8VHF2 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.21■■□□□ 1.15
Cdhr5Q8VHF2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr5Q8VHF2 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.21■■□□□ 1.15
Cdhr5Q8VHF2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Cdhr5Q8VHF2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.2■■□□□ 1.14
Cdhr5Q8VHF2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr5Q8VHF2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Cdhr5Q8VHF2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr5Q8VHF2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.19■■□□□ 1.14
Cdhr5Q8VHF2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cdhr5Q8VHF2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cdhr5Q8VHF2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Cdhr5Q8VHF2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Cdhr5Q8VHF2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr5Q8VHF2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr5Q8VHF2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Cdhr5Q8VHF2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr5Q8VHF2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr5Q8VHF2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Cdhr5Q8VHF2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cdhr5Q8VHF2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.16■■□□□ 1.14
Cdhr5Q8VHF2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr5Q8VHF2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Cdhr5Q8VHF2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr5Q8VHF2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr5Q8VHF2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr5Q8VHF2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr5Q8VHF2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr5Q8VHF2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Cdhr5Q8VHF2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cdhr5Q8VHF2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.12■■□□□ 1.13
Cdhr5Q8VHF2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Cdhr5Q8VHF2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cdhr5Q8VHF2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cdhr5Q8VHF2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cdhr5Q8VHF2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cdhr5Q8VHF2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.11■■□□□ 1.13
Cdhr5Q8VHF2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cdhr5Q8VHF2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cdhr5Q8VHF2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.1■■□□□ 1.13
Cdhr5Q8VHF2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.09■■□□□ 1.13
Cdhr5Q8VHF2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
Cdhr5Q8VHF2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cdhr5Q8VHF2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.09■■□□□ 1.13
Cdhr5Q8VHF2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cdhr5Q8VHF2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cdhr5Q8VHF2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Cdhr5Q8VHF2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Cdhr5Q8VHF2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cdhr5Q8VHF2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cdhr5Q8VHF2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.07■■□□□ 1.12
Cdhr5Q8VHF2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cdhr5Q8VHF2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cdhr5Q8VHF2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdhr5Q8VHF2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Cdhr5Q8VHF2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cdhr5Q8VHF2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cdhr5Q8VHF2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cdhr5Q8VHF2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdhr5Q8VHF2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Cdhr5Q8VHF2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Cdhr5Q8VHF2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdhr5Q8VHF2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cdhr5Q8VHF2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Cdhr5Q8VHF2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cdhr5Q8VHF2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.04■■□□□ 1.12
Cdhr5Q8VHF2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr5Q8VHF2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr5Q8VHF2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr5Q8VHF2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr5Q8VHF2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdhr5Q8VHF2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdhr5Q8VHF2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Cdhr5Q8VHF2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms