Protein–RNA interactions for Protein: Q8VEM9

Klhdc3, Kelch domain-containing protein 3, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klhdc3Q8VEM9 Gm6821-201ENSMUST00000107540 542 ntBASIC20.71■□□□□ 0.91
Klhdc3Q8VEM9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Klhdc3Q8VEM9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Klhdc3Q8VEM9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Klhdc3Q8VEM9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Klhdc3Q8VEM9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Klhdc3Q8VEM9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Klhdc3Q8VEM9 Gm30023-201ENSMUST00000197970 889 ntBASIC20.69■□□□□ 0.9
Klhdc3Q8VEM9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Klhdc3Q8VEM9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Klhdc3Q8VEM9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.68■□□□□ 0.9
Klhdc3Q8VEM9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.67■□□□□ 0.9
Klhdc3Q8VEM9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Klhdc3Q8VEM9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Klhdc3Q8VEM9 Gm8503-201ENSMUST00000118131 455 ntBASIC20.65■□□□□ 0.9
Klhdc3Q8VEM9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.64■□□□□ 0.89
Klhdc3Q8VEM9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Klhdc3Q8VEM9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Klhdc3Q8VEM9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.63■□□□□ 0.89
Klhdc3Q8VEM9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Klhdc3Q8VEM9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Klhdc3Q8VEM9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Klhdc3Q8VEM9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Klhdc3Q8VEM9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.61■□□□□ 0.89
Klhdc3Q8VEM9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Klhdc3Q8VEM9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.61■□□□□ 0.89
Klhdc3Q8VEM9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Klhdc3Q8VEM9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Klhdc3Q8VEM9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Klhdc3Q8VEM9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Klhdc3Q8VEM9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Klhdc3Q8VEM9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klhdc3Q8VEM9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klhdc3Q8VEM9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Klhdc3Q8VEM9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klhdc3Q8VEM9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klhdc3Q8VEM9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Klhdc3Q8VEM9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.58■□□□□ 0.89
Klhdc3Q8VEM9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
Klhdc3Q8VEM9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Klhdc3Q8VEM9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Klhdc3Q8VEM9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Klhdc3Q8VEM9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.56■□□□□ 0.88
Klhdc3Q8VEM9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Klhdc3Q8VEM9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Klhdc3Q8VEM9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Klhdc3Q8VEM9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Klhdc3Q8VEM9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.55■□□□□ 0.88
Klhdc3Q8VEM9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Klhdc3Q8VEM9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Klhdc3Q8VEM9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Klhdc3Q8VEM9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Klhdc3Q8VEM9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Klhdc3Q8VEM9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Klhdc3Q8VEM9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Klhdc3Q8VEM9 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.54■□□□□ 0.88
Klhdc3Q8VEM9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Klhdc3Q8VEM9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Klhdc3Q8VEM9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Klhdc3Q8VEM9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Klhdc3Q8VEM9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Klhdc3Q8VEM9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Klhdc3Q8VEM9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Klhdc3Q8VEM9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Klhdc3Q8VEM9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Klhdc3Q8VEM9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.51■□□□□ 0.87
Klhdc3Q8VEM9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.51■□□□□ 0.87
Klhdc3Q8VEM9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Klhdc3Q8VEM9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Klhdc3Q8VEM9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Klhdc3Q8VEM9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Klhdc3Q8VEM9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Klhdc3Q8VEM9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Klhdc3Q8VEM9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Klhdc3Q8VEM9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Klhdc3Q8VEM9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Klhdc3Q8VEM9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Klhdc3Q8VEM9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Klhdc3Q8VEM9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.47■□□□□ 0.87
Klhdc3Q8VEM9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Klhdc3Q8VEM9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Klhdc3Q8VEM9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Klhdc3Q8VEM9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Klhdc3Q8VEM9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Klhdc3Q8VEM9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Klhdc3Q8VEM9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Klhdc3Q8VEM9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Klhdc3Q8VEM9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Klhdc3Q8VEM9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Klhdc3Q8VEM9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.42■□□□□ 0.86
Klhdc3Q8VEM9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Klhdc3Q8VEM9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.41■□□□□ 0.86
Klhdc3Q8VEM9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.41■□□□□ 0.86
Klhdc3Q8VEM9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Klhdc3Q8VEM9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Klhdc3Q8VEM9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Klhdc3Q8VEM9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Klhdc3Q8VEM9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Klhdc3Q8VEM9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Klhdc3Q8VEM9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms