Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Swsap1Q8VCI7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Swsap1Q8VCI7 Nkain2-201ENSMUST00000092602 558 ntBASIC21.35■■□□□ 1.01
Swsap1Q8VCI7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Swsap1Q8VCI7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Swsap1Q8VCI7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Swsap1Q8VCI7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Swsap1Q8VCI7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Swsap1Q8VCI7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.33■■□□□ 1.01
Swsap1Q8VCI7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Swsap1Q8VCI7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Swsap1Q8VCI7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.32■■□□□ 1
Swsap1Q8VCI7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.31■■□□□ 1
Swsap1Q8VCI7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Swsap1Q8VCI7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.31■■□□□ 1
Swsap1Q8VCI7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.31■■□□□ 1
Swsap1Q8VCI7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Swsap1Q8VCI7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Swsap1Q8VCI7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.31■■□□□ 1
Swsap1Q8VCI7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Swsap1Q8VCI7 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.3■■□□□ 1
Swsap1Q8VCI7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.3■■□□□ 1
Swsap1Q8VCI7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Swsap1Q8VCI7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.3■■□□□ 1
Swsap1Q8VCI7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Swsap1Q8VCI7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.29■■□□□ 1
Swsap1Q8VCI7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Swsap1Q8VCI7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.29■■□□□ 1
Swsap1Q8VCI7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Swsap1Q8VCI7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.28■■□□□ 1
Swsap1Q8VCI7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Swsap1Q8VCI7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Swsap1Q8VCI7 Amer2-203ENSMUST00000225247 2662 ntBASIC21.27■■□□□ 1
Swsap1Q8VCI7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Swsap1Q8VCI7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Swsap1Q8VCI7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Swsap1Q8VCI7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Swsap1Q8VCI7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Swsap1Q8VCI7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Swsap1Q8VCI7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Swsap1Q8VCI7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Swsap1Q8VCI7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Swsap1Q8VCI7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Swsap1Q8VCI7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Swsap1Q8VCI7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Swsap1Q8VCI7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.24■□□□□ 0.99
Swsap1Q8VCI7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Swsap1Q8VCI7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.23■□□□□ 0.99
Swsap1Q8VCI7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Swsap1Q8VCI7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Swsap1Q8VCI7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Swsap1Q8VCI7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Swsap1Q8VCI7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Swsap1Q8VCI7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.22■□□□□ 0.99
Swsap1Q8VCI7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Swsap1Q8VCI7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Swsap1Q8VCI7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Swsap1Q8VCI7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Swsap1Q8VCI7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Swsap1Q8VCI7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Swsap1Q8VCI7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Swsap1Q8VCI7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Swsap1Q8VCI7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Swsap1Q8VCI7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.19■□□□□ 0.98
Swsap1Q8VCI7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Swsap1Q8VCI7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Swsap1Q8VCI7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Swsap1Q8VCI7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Swsap1Q8VCI7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Swsap1Q8VCI7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Swsap1Q8VCI7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Swsap1Q8VCI7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Swsap1Q8VCI7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Swsap1Q8VCI7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Swsap1Q8VCI7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Swsap1Q8VCI7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Swsap1Q8VCI7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Swsap1Q8VCI7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
Swsap1Q8VCI7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.14■□□□□ 0.97
Swsap1Q8VCI7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Swsap1Q8VCI7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Swsap1Q8VCI7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Swsap1Q8VCI7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.13■□□□□ 0.97
Swsap1Q8VCI7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Swsap1Q8VCI7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.13■□□□□ 0.97
Swsap1Q8VCI7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Swsap1Q8VCI7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.12■□□□□ 0.97
Swsap1Q8VCI7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Swsap1Q8VCI7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.11■□□□□ 0.97
Swsap1Q8VCI7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Swsap1Q8VCI7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Swsap1Q8VCI7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.1■□□□□ 0.97
Swsap1Q8VCI7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Swsap1Q8VCI7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Swsap1Q8VCI7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.09■□□□□ 0.97
Swsap1Q8VCI7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.09■□□□□ 0.97
Swsap1Q8VCI7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Swsap1Q8VCI7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.09■□□□□ 0.97
Swsap1Q8VCI7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Swsap1Q8VCI7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms