Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Cacnb1Q8R3Z5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cacnb1Q8R3Z5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cacnb1Q8R3Z5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cacnb1Q8R3Z5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cacnb1Q8R3Z5 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.55■■□□□ 1.84
Cacnb1Q8R3Z5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cacnb1Q8R3Z5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Cacnb1Q8R3Z5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Cacnb1Q8R3Z5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cacnb1Q8R3Z5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.52■■□□□ 1.84
Cacnb1Q8R3Z5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cacnb1Q8R3Z5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cacnb1Q8R3Z5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.51■■□□□ 1.83
Cacnb1Q8R3Z5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cacnb1Q8R3Z5 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.5■■□□□ 1.83
Cacnb1Q8R3Z5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cacnb1Q8R3Z5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cacnb1Q8R3Z5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cacnb1Q8R3Z5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cacnb1Q8R3Z5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Cacnb1Q8R3Z5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.49■■□□□ 1.83
Cacnb1Q8R3Z5 Gm30023-201ENSMUST00000197970 889 ntBASIC26.49■■□□□ 1.83
Cacnb1Q8R3Z5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cacnb1Q8R3Z5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cacnb1Q8R3Z5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cacnb1Q8R3Z5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.47■■□□□ 1.83
Cacnb1Q8R3Z5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Cacnb1Q8R3Z5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.46■■□□□ 1.83
Cacnb1Q8R3Z5 Nkain2-201ENSMUST00000092602 558 ntBASIC26.46■■□□□ 1.83
Cacnb1Q8R3Z5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Cacnb1Q8R3Z5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.44■■□□□ 1.82
Cacnb1Q8R3Z5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Cacnb1Q8R3Z5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cacnb1Q8R3Z5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cacnb1Q8R3Z5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cacnb1Q8R3Z5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.42■■□□□ 1.82
Cacnb1Q8R3Z5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cacnb1Q8R3Z5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cacnb1Q8R3Z5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cacnb1Q8R3Z5 Gm6821-201ENSMUST00000107540 542 ntBASIC26.41■■□□□ 1.82
Cacnb1Q8R3Z5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Cacnb1Q8R3Z5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Cacnb1Q8R3Z5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cacnb1Q8R3Z5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Cacnb1Q8R3Z5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cacnb1Q8R3Z5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.4■■□□□ 1.82
Cacnb1Q8R3Z5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cacnb1Q8R3Z5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.39■■□□□ 1.81
Cacnb1Q8R3Z5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cacnb1Q8R3Z5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cacnb1Q8R3Z5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cacnb1Q8R3Z5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
Cacnb1Q8R3Z5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cacnb1Q8R3Z5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Cacnb1Q8R3Z5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cacnb1Q8R3Z5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cacnb1Q8R3Z5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Cacnb1Q8R3Z5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cacnb1Q8R3Z5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cacnb1Q8R3Z5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Cacnb1Q8R3Z5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cacnb1Q8R3Z5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Cacnb1Q8R3Z5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cacnb1Q8R3Z5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cacnb1Q8R3Z5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Cacnb1Q8R3Z5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cacnb1Q8R3Z5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
Cacnb1Q8R3Z5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Cacnb1Q8R3Z5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cacnb1Q8R3Z5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cacnb1Q8R3Z5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Cacnb1Q8R3Z5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cacnb1Q8R3Z5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.28■■□□□ 1.8
Cacnb1Q8R3Z5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cacnb1Q8R3Z5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cacnb1Q8R3Z5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cacnb1Q8R3Z5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cacnb1Q8R3Z5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cacnb1Q8R3Z5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.27■■□□□ 1.8
Cacnb1Q8R3Z5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.27■■□□□ 1.8
Cacnb1Q8R3Z5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cacnb1Q8R3Z5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cacnb1Q8R3Z5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
Cacnb1Q8R3Z5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cacnb1Q8R3Z5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.25■■□□□ 1.79
Cacnb1Q8R3Z5 Gm8503-201ENSMUST00000118131 455 ntBASIC26.25■■□□□ 1.79
Cacnb1Q8R3Z5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.25■■□□□ 1.79
Cacnb1Q8R3Z5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cacnb1Q8R3Z5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cacnb1Q8R3Z5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Cacnb1Q8R3Z5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cacnb1Q8R3Z5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cacnb1Q8R3Z5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cacnb1Q8R3Z5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cacnb1Q8R3Z5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.21■■□□□ 1.79
Cacnb1Q8R3Z5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.2■■□□□ 1.79
Cacnb1Q8R3Z5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Cacnb1Q8R3Z5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cacnb1Q8R3Z5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms