Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.83■■□□□ 1.4
Alms1Q8K4E0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.82■■□□□ 1.4
Alms1Q8K4E0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Alms1Q8K4E0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Alms1Q8K4E0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Alms1Q8K4E0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Alms1Q8K4E0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Alms1Q8K4E0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Alms1Q8K4E0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.79■■□□□ 1.4
Alms1Q8K4E0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Alms1Q8K4E0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Alms1Q8K4E0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Alms1Q8K4E0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.78■■□□□ 1.4
Alms1Q8K4E0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Alms1Q8K4E0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Alms1Q8K4E0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Alms1Q8K4E0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Alms1Q8K4E0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Alms1Q8K4E0 Gm6311-201ENSMUST00000073790 878 ntBASIC23.77■■□□□ 1.4
Alms1Q8K4E0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Alms1Q8K4E0 Gm15039-201ENSMUST00000118914 875 ntBASIC23.77■■□□□ 1.4
Alms1Q8K4E0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Alms1Q8K4E0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Alms1Q8K4E0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Alms1Q8K4E0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Alms1Q8K4E0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Alms1Q8K4E0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.75■■□□□ 1.39
Alms1Q8K4E0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Alms1Q8K4E0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Alms1Q8K4E0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.74■■□□□ 1.39
Alms1Q8K4E0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Alms1Q8K4E0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Alms1Q8K4E0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Alms1Q8K4E0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Alms1Q8K4E0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Alms1Q8K4E0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Alms1Q8K4E0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.71■■□□□ 1.39
Alms1Q8K4E0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.71■■□□□ 1.39
Alms1Q8K4E0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Alms1Q8K4E0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Alms1Q8K4E0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Alms1Q8K4E0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Alms1Q8K4E0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Alms1Q8K4E0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Alms1Q8K4E0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Alms1Q8K4E0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Alms1Q8K4E0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.69■■□□□ 1.38
Alms1Q8K4E0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Alms1Q8K4E0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Alms1Q8K4E0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Alms1Q8K4E0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Alms1Q8K4E0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Alms1Q8K4E0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Alms1Q8K4E0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.65■■□□□ 1.38
Alms1Q8K4E0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Alms1Q8K4E0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Alms1Q8K4E0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Alms1Q8K4E0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Alms1Q8K4E0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Alms1Q8K4E0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Alms1Q8K4E0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Alms1Q8K4E0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Alms1Q8K4E0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Alms1Q8K4E0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Alms1Q8K4E0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.6■■□□□ 1.37
Alms1Q8K4E0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Alms1Q8K4E0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.58■■□□□ 1.37
Alms1Q8K4E0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Alms1Q8K4E0 Gm4799-201ENSMUST00000095396 657 ntBASIC23.58■■□□□ 1.36
Alms1Q8K4E0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Alms1Q8K4E0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Alms1Q8K4E0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.57■■□□□ 1.36
Alms1Q8K4E0 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.57■■□□□ 1.36
Alms1Q8K4E0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Alms1Q8K4E0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Alms1Q8K4E0 Gm30023-201ENSMUST00000197970 889 ntBASIC23.55■■□□□ 1.36
Alms1Q8K4E0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Alms1Q8K4E0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Alms1Q8K4E0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Alms1Q8K4E0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Alms1Q8K4E0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Alms1Q8K4E0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
Alms1Q8K4E0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Alms1Q8K4E0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Alms1Q8K4E0 Particl-201ENSMUST00000205370 1560 ntBASIC23.52■■□□□ 1.36
Alms1Q8K4E0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Alms1Q8K4E0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Alms1Q8K4E0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Alms1Q8K4E0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Alms1Q8K4E0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Alms1Q8K4E0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Alms1Q8K4E0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Alms1Q8K4E0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.49■■□□□ 1.35
Alms1Q8K4E0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Alms1Q8K4E0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Alms1Q8K4E0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.49■■□□□ 1.35
Alms1Q8K4E0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Alms1Q8K4E0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Alms1Q8K4E0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Alms1Q8K4E0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms