Protein–RNA interactions for Protein: Q8K2V1

Ppp4r1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1Q8K2V1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ppp4r1Q8K2V1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ppp4r1Q8K2V1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ppp4r1Q8K2V1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ppp4r1Q8K2V1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ppp4r1Q8K2V1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ppp4r1Q8K2V1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ppp4r1Q8K2V1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ppp4r1Q8K2V1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ppp4r1Q8K2V1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ppp4r1Q8K2V1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ppp4r1Q8K2V1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ppp4r1Q8K2V1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Ppp4r1Q8K2V1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ppp4r1Q8K2V1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ppp4r1Q8K2V1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ppp4r1Q8K2V1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.21■■□□□ 1.47
Ppp4r1Q8K2V1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Ppp4r1Q8K2V1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ppp4r1Q8K2V1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Ppp4r1Q8K2V1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ppp4r1Q8K2V1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ppp4r1Q8K2V1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.19■■□□□ 1.46
Ppp4r1Q8K2V1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ppp4r1Q8K2V1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ppp4r1Q8K2V1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
Ppp4r1Q8K2V1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ppp4r1Q8K2V1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.17■■□□□ 1.46
Ppp4r1Q8K2V1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ppp4r1Q8K2V1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ppp4r1Q8K2V1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
Ppp4r1Q8K2V1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ppp4r1Q8K2V1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ppp4r1Q8K2V1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Ppp4r1Q8K2V1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Ppp4r1Q8K2V1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.14■■□□□ 1.45
Ppp4r1Q8K2V1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ppp4r1Q8K2V1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ppp4r1Q8K2V1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Ppp4r1Q8K2V1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ppp4r1Q8K2V1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Ppp4r1Q8K2V1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ppp4r1Q8K2V1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ppp4r1Q8K2V1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Ppp4r1Q8K2V1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ppp4r1Q8K2V1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.11■■□□□ 1.45
Ppp4r1Q8K2V1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ppp4r1Q8K2V1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ppp4r1Q8K2V1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ppp4r1Q8K2V1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ppp4r1Q8K2V1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Ppp4r1Q8K2V1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ppp4r1Q8K2V1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ppp4r1Q8K2V1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ppp4r1Q8K2V1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ppp4r1Q8K2V1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ppp4r1Q8K2V1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ppp4r1Q8K2V1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ppp4r1Q8K2V1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ppp4r1Q8K2V1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ppp4r1Q8K2V1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ppp4r1Q8K2V1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ppp4r1Q8K2V1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ppp4r1Q8K2V1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
Ppp4r1Q8K2V1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.04■■□□□ 1.44
Ppp4r1Q8K2V1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Ppp4r1Q8K2V1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ppp4r1Q8K2V1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ppp4r1Q8K2V1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ppp4r1Q8K2V1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Ppp4r1Q8K2V1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Ppp4r1Q8K2V1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ppp4r1Q8K2V1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Ppp4r1Q8K2V1 Gm30023-201ENSMUST00000197970 889 ntBASIC23.99■■□□□ 1.43
Ppp4r1Q8K2V1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ppp4r1Q8K2V1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ppp4r1Q8K2V1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ppp4r1Q8K2V1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Ppp4r1Q8K2V1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ppp4r1Q8K2V1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.98■■□□□ 1.43
Ppp4r1Q8K2V1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ppp4r1Q8K2V1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ppp4r1Q8K2V1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ppp4r1Q8K2V1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ppp4r1Q8K2V1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ppp4r1Q8K2V1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.96■■□□□ 1.43
Ppp4r1Q8K2V1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ppp4r1Q8K2V1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ppp4r1Q8K2V1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ppp4r1Q8K2V1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Ppp4r1Q8K2V1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Ppp4r1Q8K2V1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ppp4r1Q8K2V1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ppp4r1Q8K2V1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ppp4r1Q8K2V1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Ppp4r1Q8K2V1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.94■■□□□ 1.42
Ppp4r1Q8K2V1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.94■■□□□ 1.42
Ppp4r1Q8K2V1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Ppp4r1Q8K2V1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ppp4r1Q8K2V1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms