Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rtn1Q8K0T0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtn1Q8K0T0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtn1Q8K0T0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtn1Q8K0T0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.77■■■□□ 2.04
Rtn1Q8K0T0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rtn1Q8K0T0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rtn1Q8K0T0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rtn1Q8K0T0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rtn1Q8K0T0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Rtn1Q8K0T0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.74■■■□□ 2.03
Rtn1Q8K0T0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Rtn1Q8K0T0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Rtn1Q8K0T0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.73■■■□□ 2.03
Rtn1Q8K0T0 Gm30023-201ENSMUST00000197970 889 ntBASIC27.72■■■□□ 2.03
Rtn1Q8K0T0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rtn1Q8K0T0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rtn1Q8K0T0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rtn1Q8K0T0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.71■■■□□ 2.03
Rtn1Q8K0T0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Rtn1Q8K0T0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Rtn1Q8K0T0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
Rtn1Q8K0T0 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.69■■■□□ 2.02
Rtn1Q8K0T0 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.69■■■□□ 2.02
Rtn1Q8K0T0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rtn1Q8K0T0 Nkain2-201ENSMUST00000092602 558 ntBASIC27.67■■■□□ 2.02
Rtn1Q8K0T0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.66■■■□□ 2.02
Rtn1Q8K0T0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Rtn1Q8K0T0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Rtn1Q8K0T0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.65■■■□□ 2.02
Rtn1Q8K0T0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.65■■■□□ 2.02
Rtn1Q8K0T0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.65■■■□□ 2.02
Rtn1Q8K0T0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Rtn1Q8K0T0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Rtn1Q8K0T0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rtn1Q8K0T0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rtn1Q8K0T0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Rtn1Q8K0T0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Rtn1Q8K0T0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rtn1Q8K0T0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rtn1Q8K0T0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.61■■■□□ 2.01
Rtn1Q8K0T0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
Rtn1Q8K0T0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rtn1Q8K0T0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Rtn1Q8K0T0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
Rtn1Q8K0T0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rtn1Q8K0T0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Rtn1Q8K0T0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rtn1Q8K0T0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.59■■■□□ 2.01
Rtn1Q8K0T0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rtn1Q8K0T0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rtn1Q8K0T0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rtn1Q8K0T0 Gm6821-201ENSMUST00000107540 542 ntBASIC27.58■■■□□ 2.01
Rtn1Q8K0T0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rtn1Q8K0T0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rtn1Q8K0T0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
Rtn1Q8K0T0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.57■■■□□ 2
Rtn1Q8K0T0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rtn1Q8K0T0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rtn1Q8K0T0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Rtn1Q8K0T0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.56■■■□□ 2
Rtn1Q8K0T0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.55■■■□□ 2
Rtn1Q8K0T0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rtn1Q8K0T0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
Rtn1Q8K0T0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Rtn1Q8K0T0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Rtn1Q8K0T0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.53■■■□□ 2
Rtn1Q8K0T0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Rtn1Q8K0T0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.52■■■□□ 2
Rtn1Q8K0T0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.52■■■□□ 2
Rtn1Q8K0T0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.52■■■□□ 2
Rtn1Q8K0T0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Rtn1Q8K0T0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Rtn1Q8K0T0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.5■■□□□ 1.99
Rtn1Q8K0T0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Rtn1Q8K0T0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtn1Q8K0T0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Rtn1Q8K0T0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Rtn1Q8K0T0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Rtn1Q8K0T0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.46■■□□□ 1.99
Rtn1Q8K0T0 Gm8503-201ENSMUST00000118131 455 ntBASIC27.46■■□□□ 1.99
Rtn1Q8K0T0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.46■■□□□ 1.99
Rtn1Q8K0T0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.45■■□□□ 1.98
Rtn1Q8K0T0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.45■■□□□ 1.98
Rtn1Q8K0T0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
Rtn1Q8K0T0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.43■■□□□ 1.98
Rtn1Q8K0T0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.43■■□□□ 1.98
Rtn1Q8K0T0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Rtn1Q8K0T0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rtn1Q8K0T0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Rtn1Q8K0T0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
Rtn1Q8K0T0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Rtn1Q8K0T0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.4■■□□□ 1.98
Rtn1Q8K0T0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Rtn1Q8K0T0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.39■■□□□ 1.98
Rtn1Q8K0T0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Rtn1Q8K0T0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Rtn1Q8K0T0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.37■■□□□ 1.97
Rtn1Q8K0T0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rtn1Q8K0T0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms