Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rdh1Q8CGV4 Gm7432-201ENSMUST00000210343 879 ntBASIC23.59■■□□□ 1.37
Rdh1Q8CGV4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.59■■□□□ 1.37
Rdh1Q8CGV4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rdh1Q8CGV4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
Rdh1Q8CGV4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rdh1Q8CGV4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rdh1Q8CGV4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Rdh1Q8CGV4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Rdh1Q8CGV4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rdh1Q8CGV4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.54■■□□□ 1.36
Rdh1Q8CGV4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rdh1Q8CGV4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.53■■□□□ 1.36
Rdh1Q8CGV4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rdh1Q8CGV4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rdh1Q8CGV4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rdh1Q8CGV4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.51■■□□□ 1.35
Rdh1Q8CGV4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rdh1Q8CGV4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rdh1Q8CGV4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rdh1Q8CGV4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rdh1Q8CGV4 Gm11599-201ENSMUST00000118720 878 ntBASIC23.47■■□□□ 1.35
Rdh1Q8CGV4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rdh1Q8CGV4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.46■■□□□ 1.35
Rdh1Q8CGV4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.46■■□□□ 1.35
Rdh1Q8CGV4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rdh1Q8CGV4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Rdh1Q8CGV4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rdh1Q8CGV4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rdh1Q8CGV4 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.44■■□□□ 1.34
Rdh1Q8CGV4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
Rdh1Q8CGV4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.43■■□□□ 1.34
Rdh1Q8CGV4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.43■■□□□ 1.34
Rdh1Q8CGV4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rdh1Q8CGV4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rdh1Q8CGV4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.42■■□□□ 1.34
Rdh1Q8CGV4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rdh1Q8CGV4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rdh1Q8CGV4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rdh1Q8CGV4 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.4■■□□□ 1.34
Rdh1Q8CGV4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rdh1Q8CGV4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rdh1Q8CGV4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.34
Rdh1Q8CGV4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rdh1Q8CGV4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rdh1Q8CGV4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rdh1Q8CGV4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rdh1Q8CGV4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rdh1Q8CGV4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rdh1Q8CGV4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.37■■□□□ 1.33
Rdh1Q8CGV4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
Rdh1Q8CGV4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Rdh1Q8CGV4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rdh1Q8CGV4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rdh1Q8CGV4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Rdh1Q8CGV4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rdh1Q8CGV4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rdh1Q8CGV4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.35■■□□□ 1.33
Rdh1Q8CGV4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rdh1Q8CGV4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rdh1Q8CGV4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rdh1Q8CGV4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
Rdh1Q8CGV4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rdh1Q8CGV4 Particl-201ENSMUST00000205370 1560 ntBASIC23.33■■□□□ 1.33
Rdh1Q8CGV4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.33■■□□□ 1.33
Rdh1Q8CGV4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rdh1Q8CGV4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rdh1Q8CGV4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rdh1Q8CGV4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rdh1Q8CGV4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rdh1Q8CGV4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Rdh1Q8CGV4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Rdh1Q8CGV4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Rdh1Q8CGV4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rdh1Q8CGV4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Rdh1Q8CGV4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rdh1Q8CGV4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rdh1Q8CGV4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rdh1Q8CGV4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rdh1Q8CGV4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rdh1Q8CGV4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rdh1Q8CGV4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rdh1Q8CGV4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rdh1Q8CGV4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rdh1Q8CGV4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rdh1Q8CGV4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.22■■□□□ 1.31
Rdh1Q8CGV4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.22■■□□□ 1.31
Rdh1Q8CGV4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rdh1Q8CGV4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.22■■□□□ 1.31
Rdh1Q8CGV4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rdh1Q8CGV4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rdh1Q8CGV4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.21■■□□□ 1.31
Rdh1Q8CGV4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Rdh1Q8CGV4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rdh1Q8CGV4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.19■■□□□ 1.3
Rdh1Q8CGV4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rdh1Q8CGV4 Amer2-203ENSMUST00000225247 2662 ntBASIC23.17■■□□□ 1.3
Rdh1Q8CGV4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rdh1Q8CGV4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
Rdh1Q8CGV4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms