Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hist1h2aaQ8CGP4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Hist1h2aaQ8CGP4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Hist1h2aaQ8CGP4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Hist1h2aaQ8CGP4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Hist1h2aaQ8CGP4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hist1h2aaQ8CGP4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.37■■□□□ 1.17
Hist1h2aaQ8CGP4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hist1h2aaQ8CGP4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hist1h2aaQ8CGP4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Hist1h2aaQ8CGP4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hist1h2aaQ8CGP4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hist1h2aaQ8CGP4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hist1h2aaQ8CGP4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hist1h2aaQ8CGP4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hist1h2aaQ8CGP4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.34■■□□□ 1.17
Hist1h2aaQ8CGP4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hist1h2aaQ8CGP4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Hist1h2aaQ8CGP4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hist1h2aaQ8CGP4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Hist1h2aaQ8CGP4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hist1h2aaQ8CGP4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Hist1h2aaQ8CGP4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hist1h2aaQ8CGP4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Hist1h2aaQ8CGP4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Hist1h2aaQ8CGP4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hist1h2aaQ8CGP4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hist1h2aaQ8CGP4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hist1h2aaQ8CGP4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.29■■□□□ 1.16
Hist1h2aaQ8CGP4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hist1h2aaQ8CGP4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hist1h2aaQ8CGP4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.27■■□□□ 1.16
Hist1h2aaQ8CGP4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hist1h2aaQ8CGP4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hist1h2aaQ8CGP4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.26■■□□□ 1.15
Hist1h2aaQ8CGP4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Hist1h2aaQ8CGP4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hist1h2aaQ8CGP4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2aaQ8CGP4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2aaQ8CGP4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2aaQ8CGP4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2aaQ8CGP4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.25■■□□□ 1.15
Hist1h2aaQ8CGP4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2aaQ8CGP4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2aaQ8CGP4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2aaQ8CGP4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Hist1h2aaQ8CGP4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.23■■□□□ 1.15
Hist1h2aaQ8CGP4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hist1h2aaQ8CGP4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hist1h2aaQ8CGP4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hist1h2aaQ8CGP4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hist1h2aaQ8CGP4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hist1h2aaQ8CGP4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.22■■□□□ 1.15
Hist1h2aaQ8CGP4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hist1h2aaQ8CGP4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hist1h2aaQ8CGP4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hist1h2aaQ8CGP4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Hist1h2aaQ8CGP4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Hist1h2aaQ8CGP4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hist1h2aaQ8CGP4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.2■■□□□ 1.14
Hist1h2aaQ8CGP4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hist1h2aaQ8CGP4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Hist1h2aaQ8CGP4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hist1h2aaQ8CGP4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hist1h2aaQ8CGP4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hist1h2aaQ8CGP4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hist1h2aaQ8CGP4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.17■■□□□ 1.14
Hist1h2aaQ8CGP4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hist1h2aaQ8CGP4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Hist1h2aaQ8CGP4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2aaQ8CGP4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2aaQ8CGP4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2aaQ8CGP4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Hist1h2aaQ8CGP4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Hist1h2aaQ8CGP4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Hist1h2aaQ8CGP4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.15■■□□□ 1.14
Hist1h2aaQ8CGP4 Gm30023-201ENSMUST00000197970 889 ntBASIC22.15■■□□□ 1.14
Hist1h2aaQ8CGP4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hist1h2aaQ8CGP4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Hist1h2aaQ8CGP4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Hist1h2aaQ8CGP4 Nkain2-201ENSMUST00000092602 558 ntBASIC22.14■■□□□ 1.13
Hist1h2aaQ8CGP4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hist1h2aaQ8CGP4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Hist1h2aaQ8CGP4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.13■■□□□ 1.13
Hist1h2aaQ8CGP4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hist1h2aaQ8CGP4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hist1h2aaQ8CGP4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Hist1h2aaQ8CGP4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hist1h2aaQ8CGP4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Hist1h2aaQ8CGP4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.11■■□□□ 1.13
Hist1h2aaQ8CGP4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Hist1h2aaQ8CGP4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hist1h2aaQ8CGP4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hist1h2aaQ8CGP4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Hist1h2aaQ8CGP4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
Hist1h2aaQ8CGP4 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.1■■□□□ 1.13
Hist1h2aaQ8CGP4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hist1h2aaQ8CGP4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
Hist1h2aaQ8CGP4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Hist1h2aaQ8CGP4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms