Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rbm28Q8CGC6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rbm28Q8CGC6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rbm28Q8CGC6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.31■■■□□ 2.12
Rbm28Q8CGC6 Gm11599-201ENSMUST00000118720 878 ntBASIC28.31■■■□□ 2.12
Rbm28Q8CGC6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.31■■■□□ 2.12
Rbm28Q8CGC6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rbm28Q8CGC6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Rbm28Q8CGC6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rbm28Q8CGC6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rbm28Q8CGC6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.28■■■□□ 2.12
Rbm28Q8CGC6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rbm28Q8CGC6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rbm28Q8CGC6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rbm28Q8CGC6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.26■■■□□ 2.11
Rbm28Q8CGC6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rbm28Q8CGC6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rbm28Q8CGC6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Rbm28Q8CGC6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rbm28Q8CGC6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rbm28Q8CGC6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rbm28Q8CGC6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.24■■■□□ 2.11
Rbm28Q8CGC6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rbm28Q8CGC6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rbm28Q8CGC6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rbm28Q8CGC6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rbm28Q8CGC6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Rbm28Q8CGC6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.23■■■□□ 2.11
Rbm28Q8CGC6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rbm28Q8CGC6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.22■■■□□ 2.11
Rbm28Q8CGC6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rbm28Q8CGC6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rbm28Q8CGC6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Rbm28Q8CGC6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rbm28Q8CGC6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Rbm28Q8CGC6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rbm28Q8CGC6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Rbm28Q8CGC6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.2■■■□□ 2.1
Rbm28Q8CGC6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Rbm28Q8CGC6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rbm28Q8CGC6 Amer2-203ENSMUST00000225247 2662 ntBASIC28.18■■■□□ 2.1
Rbm28Q8CGC6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rbm28Q8CGC6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rbm28Q8CGC6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Rbm28Q8CGC6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rbm28Q8CGC6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.16■■■□□ 2.1
Rbm28Q8CGC6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Rbm28Q8CGC6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rbm28Q8CGC6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rbm28Q8CGC6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rbm28Q8CGC6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rbm28Q8CGC6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Rbm28Q8CGC6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rbm28Q8CGC6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Rbm28Q8CGC6 Gm30023-201ENSMUST00000197970 889 ntBASIC28.13■■■□□ 2.09
Rbm28Q8CGC6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.12■■■□□ 2.09
Rbm28Q8CGC6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rbm28Q8CGC6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rbm28Q8CGC6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.11■■■□□ 2.09
Rbm28Q8CGC6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Rbm28Q8CGC6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Rbm28Q8CGC6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rbm28Q8CGC6 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.1■■■□□ 2.09
Rbm28Q8CGC6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Rbm28Q8CGC6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Rbm28Q8CGC6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Rbm28Q8CGC6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.06■■■□□ 2.08
Rbm28Q8CGC6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rbm28Q8CGC6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rbm28Q8CGC6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rbm28Q8CGC6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rbm28Q8CGC6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.03■■■□□ 2.08
Rbm28Q8CGC6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rbm28Q8CGC6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.02■■■□□ 2.08
Rbm28Q8CGC6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Rbm28Q8CGC6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.01■■■□□ 2.07
Rbm28Q8CGC6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Rbm28Q8CGC6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.01■■■□□ 2.07
Rbm28Q8CGC6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Rbm28Q8CGC6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rbm28Q8CGC6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rbm28Q8CGC6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Rbm28Q8CGC6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
Rbm28Q8CGC6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rbm28Q8CGC6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.98■■■□□ 2.07
Rbm28Q8CGC6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.98■■■□□ 2.07
Rbm28Q8CGC6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rbm28Q8CGC6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Rbm28Q8CGC6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Rbm28Q8CGC6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
Rbm28Q8CGC6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Rbm28Q8CGC6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rbm28Q8CGC6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.94■■■□□ 2.06
Rbm28Q8CGC6 Particl-201ENSMUST00000205370 1560 ntBASIC27.94■■■□□ 2.06
Rbm28Q8CGC6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.92■■■□□ 2.06
Rbm28Q8CGC6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rbm28Q8CGC6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.9■■■□□ 2.06
Rbm28Q8CGC6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Rbm28Q8CGC6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
Rbm28Q8CGC6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.88■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms