Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ShfQ8CG80 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ShfQ8CG80 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.4■■□□□ 1.02
ShfQ8CG80 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ShfQ8CG80 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ShfQ8CG80 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
ShfQ8CG80 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
ShfQ8CG80 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
ShfQ8CG80 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ShfQ8CG80 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ShfQ8CG80 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ShfQ8CG80 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ShfQ8CG80 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
ShfQ8CG80 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ShfQ8CG80 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ShfQ8CG80 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ShfQ8CG80 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ShfQ8CG80 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ShfQ8CG80 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShfQ8CG80 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ShfQ8CG80 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ShfQ8CG80 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ShfQ8CG80 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.32■■□□□ 1
ShfQ8CG80 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.32■■□□□ 1
ShfQ8CG80 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ShfQ8CG80 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ShfQ8CG80 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.31■■□□□ 1
ShfQ8CG80 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ShfQ8CG80 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ShfQ8CG80 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ShfQ8CG80 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.3■■□□□ 1
ShfQ8CG80 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ShfQ8CG80 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ShfQ8CG80 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ShfQ8CG80 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ShfQ8CG80 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.29■■□□□ 1
ShfQ8CG80 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ShfQ8CG80 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.28■■□□□ 1
ShfQ8CG80 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.28■■□□□ 1
ShfQ8CG80 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
ShfQ8CG80 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.27■■□□□ 1
ShfQ8CG80 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShfQ8CG80 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShfQ8CG80 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.26■□□□□ 0.99
ShfQ8CG80 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ShfQ8CG80 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.25■□□□□ 0.99
ShfQ8CG80 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ShfQ8CG80 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShfQ8CG80 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
ShfQ8CG80 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.24■□□□□ 0.99
ShfQ8CG80 Zfp131-205ENSMUST00000223812 663 ntBASIC21.23■□□□□ 0.99
ShfQ8CG80 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShfQ8CG80 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShfQ8CG80 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShfQ8CG80 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShfQ8CG80 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShfQ8CG80 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShfQ8CG80 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ShfQ8CG80 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShfQ8CG80 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShfQ8CG80 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ShfQ8CG80 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ShfQ8CG80 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ShfQ8CG80 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.18■□□□□ 0.98
ShfQ8CG80 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ShfQ8CG80 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShfQ8CG80 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShfQ8CG80 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShfQ8CG80 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ShfQ8CG80 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShfQ8CG80 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.15■□□□□ 0.98
ShfQ8CG80 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.15■□□□□ 0.98
ShfQ8CG80 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShfQ8CG80 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ShfQ8CG80 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.14■□□□□ 0.97
ShfQ8CG80 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.14■□□□□ 0.97
ShfQ8CG80 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ShfQ8CG80 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ShfQ8CG80 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
ShfQ8CG80 Gm24970-201ENSMUST00000175582 82 ntBASIC21.13■□□□□ 0.97
ShfQ8CG80 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.13■□□□□ 0.97
ShfQ8CG80 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShfQ8CG80 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShfQ8CG80 Gm9397-201ENSMUST00000200125 605 ntBASIC21.12■□□□□ 0.97
ShfQ8CG80 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ShfQ8CG80 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShfQ8CG80 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShfQ8CG80 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.1■□□□□ 0.97
ShfQ8CG80 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ShfQ8CG80 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ShfQ8CG80 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.1■□□□□ 0.97
ShfQ8CG80 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShfQ8CG80 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShfQ8CG80 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ShfQ8CG80 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ShfQ8CG80 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.08■□□□□ 0.97
ShfQ8CG80 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.08■□□□□ 0.97
ShfQ8CG80 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShfQ8CG80 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ShfQ8CG80 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms