Protein–RNA interactions for Protein: Q8CDE2

Ccin, Calicin, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcinQ8CDE2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CcinQ8CDE2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
CcinQ8CDE2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.26■■□□□ 1.47
CcinQ8CDE2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CcinQ8CDE2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CcinQ8CDE2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CcinQ8CDE2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CcinQ8CDE2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CcinQ8CDE2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CcinQ8CDE2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CcinQ8CDE2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.22■■□□□ 1.47
CcinQ8CDE2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CcinQ8CDE2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
CcinQ8CDE2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CcinQ8CDE2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.21■■□□□ 1.47
CcinQ8CDE2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CcinQ8CDE2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CcinQ8CDE2 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.18■■□□□ 1.46
CcinQ8CDE2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CcinQ8CDE2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CcinQ8CDE2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CcinQ8CDE2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CcinQ8CDE2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CcinQ8CDE2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CcinQ8CDE2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CcinQ8CDE2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CcinQ8CDE2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CcinQ8CDE2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
CcinQ8CDE2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.14■■□□□ 1.45
CcinQ8CDE2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CcinQ8CDE2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
CcinQ8CDE2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CcinQ8CDE2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CcinQ8CDE2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CcinQ8CDE2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CcinQ8CDE2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.12■■□□□ 1.45
CcinQ8CDE2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CcinQ8CDE2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CcinQ8CDE2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CcinQ8CDE2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CcinQ8CDE2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CcinQ8CDE2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CcinQ8CDE2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CcinQ8CDE2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.08■■□□□ 1.45
CcinQ8CDE2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CcinQ8CDE2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CcinQ8CDE2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CcinQ8CDE2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CcinQ8CDE2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.07■■□□□ 1.44
CcinQ8CDE2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CcinQ8CDE2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CcinQ8CDE2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.07■■□□□ 1.44
CcinQ8CDE2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CcinQ8CDE2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CcinQ8CDE2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.05■■□□□ 1.44
CcinQ8CDE2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.05■■□□□ 1.44
CcinQ8CDE2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.04■■□□□ 1.44
CcinQ8CDE2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CcinQ8CDE2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CcinQ8CDE2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.03■■□□□ 1.44
CcinQ8CDE2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CcinQ8CDE2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.02■■□□□ 1.44
CcinQ8CDE2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CcinQ8CDE2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CcinQ8CDE2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CcinQ8CDE2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24■■□□□ 1.43
CcinQ8CDE2 Scarna2-201ENSMUST00000157560 414 ntBASIC23.99■■□□□ 1.43
CcinQ8CDE2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CcinQ8CDE2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CcinQ8CDE2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CcinQ8CDE2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CcinQ8CDE2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CcinQ8CDE2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CcinQ8CDE2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CcinQ8CDE2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CcinQ8CDE2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CcinQ8CDE2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.96■■□□□ 1.43
CcinQ8CDE2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CcinQ8CDE2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CcinQ8CDE2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CcinQ8CDE2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CcinQ8CDE2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.94■■□□□ 1.42
CcinQ8CDE2 Gm9806-201ENSMUST00000051080 552 ntBASIC23.94■■□□□ 1.42
CcinQ8CDE2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CcinQ8CDE2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CcinQ8CDE2 Gm11687-201ENSMUST00000118911 886 ntBASIC23.93■■□□□ 1.42
CcinQ8CDE2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CcinQ8CDE2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CcinQ8CDE2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CcinQ8CDE2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CcinQ8CDE2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CcinQ8CDE2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.9■■□□□ 1.42
CcinQ8CDE2 Gm12366-201ENSMUST00000121722 873 ntBASIC23.9■■□□□ 1.42
CcinQ8CDE2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.9■■□□□ 1.42
CcinQ8CDE2 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.9■■□□□ 1.42
CcinQ8CDE2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.9■■□□□ 1.42
CcinQ8CDE2 Gm5786-201ENSMUST00000085368 882 ntBASIC23.9■■□□□ 1.42
CcinQ8CDE2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.89■■□□□ 1.41
CcinQ8CDE2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CcinQ8CDE2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms