Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Cps1Q8C196 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Cps1Q8C196 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC33.7■■■□□ 2.99
Cps1Q8C196 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Cps1Q8C196 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC33.7■■■□□ 2.99
Cps1Q8C196 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
Cps1Q8C196 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Cps1Q8C196 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Cps1Q8C196 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Cps1Q8C196 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC33.63■■■□□ 2.97
Cps1Q8C196 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Cps1Q8C196 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
Cps1Q8C196 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Cps1Q8C196 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Cps1Q8C196 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC33.61■■■□□ 2.97
Cps1Q8C196 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Cps1Q8C196 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Cps1Q8C196 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
Cps1Q8C196 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Cps1Q8C196 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC33.59■■■□□ 2.97
Cps1Q8C196 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Cps1Q8C196 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Cps1Q8C196 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
Cps1Q8C196 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC33.57■■■□□ 2.96
Cps1Q8C196 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Cps1Q8C196 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Cps1Q8C196 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC33.53■■■□□ 2.96
Cps1Q8C196 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Cps1Q8C196 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC33.53■■■□□ 2.96
Cps1Q8C196 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC33.52■■■□□ 2.96
Cps1Q8C196 Pcf11-205ENSMUST00000208255 1720 ntBASIC33.52■■■□□ 2.96
Cps1Q8C196 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Cps1Q8C196 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC33.51■■■□□ 2.95
Cps1Q8C196 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Cps1Q8C196 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
Cps1Q8C196 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Cps1Q8C196 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
Cps1Q8C196 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
Cps1Q8C196 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC33.47■■■□□ 2.95
Cps1Q8C196 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
Cps1Q8C196 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
Cps1Q8C196 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Cps1Q8C196 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33.44■■■□□ 2.94
Cps1Q8C196 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Cps1Q8C196 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC33.43■■■□□ 2.94
Cps1Q8C196 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Cps1Q8C196 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC33.42■■■□□ 2.94
Cps1Q8C196 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Cps1Q8C196 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Cps1Q8C196 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC33.39■■■□□ 2.94
Cps1Q8C196 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Cps1Q8C196 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Cps1Q8C196 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC33.38■■■□□ 2.93
Cps1Q8C196 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC33.38■■■□□ 2.93
Cps1Q8C196 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC33.37■■■□□ 2.93
Cps1Q8C196 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Cps1Q8C196 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC33.35■■■□□ 2.93
Cps1Q8C196 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Cps1Q8C196 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Cps1Q8C196 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC33.33■■■□□ 2.93
Cps1Q8C196 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Cps1Q8C196 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
Cps1Q8C196 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Cps1Q8C196 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Cps1Q8C196 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Cps1Q8C196 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Cps1Q8C196 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC33.29■■■□□ 2.92
Cps1Q8C196 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC33.29■■■□□ 2.92
Cps1Q8C196 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC33.29■■■□□ 2.92
Cps1Q8C196 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Cps1Q8C196 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Cps1Q8C196 Scarna2-201ENSMUST00000157560 414 ntBASIC33.28■■■□□ 2.92
Cps1Q8C196 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC33.27■■■□□ 2.92
Cps1Q8C196 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Cps1Q8C196 AC154454.1-201ENSMUST00000225253 216 ntBASIC33.27■■■□□ 2.92
Cps1Q8C196 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC33.26■■■□□ 2.91
Cps1Q8C196 Gm45364-201ENSMUST00000210883 159 ntBASIC33.26■■■□□ 2.91
Cps1Q8C196 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Cps1Q8C196 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC33.25■■■□□ 2.91
Cps1Q8C196 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Cps1Q8C196 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Cps1Q8C196 Gm9806-201ENSMUST00000051080 552 ntBASIC33.24■■■□□ 2.91
Cps1Q8C196 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC33.24■■■□□ 2.91
Cps1Q8C196 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Cps1Q8C196 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Cps1Q8C196 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Cps1Q8C196 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Cps1Q8C196 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC33.23■■■□□ 2.91
Cps1Q8C196 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC33.23■■■□□ 2.91
Cps1Q8C196 Gm4799-201ENSMUST00000095396 657 ntBASIC33.23■■■□□ 2.91
Cps1Q8C196 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cps1Q8C196 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Cps1Q8C196 Pkd1-207ENSMUST00000228550 1050 ntBASIC33.22■■■□□ 2.91
Cps1Q8C196 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cps1Q8C196 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Cps1Q8C196 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC33.21■■■□□ 2.91
Cps1Q8C196 Gm11687-201ENSMUST00000118911 886 ntBASIC33.21■■■□□ 2.91
Cps1Q8C196 Gm12366-201ENSMUST00000121722 873 ntBASIC33.21■■■□□ 2.91
Cps1Q8C196 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC33.21■■■□□ 2.91
Cps1Q8C196 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC33.21■■■□□ 2.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms