Protein–RNA interactions for Protein: Q8BYY4

Ttc39b, Tetratricopeptide repeat protein 39B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39bQ8BYY4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ttc39bQ8BYY4 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.97■■□□□ 1.75
Ttc39bQ8BYY4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ttc39bQ8BYY4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ttc39bQ8BYY4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ttc39bQ8BYY4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Ttc39bQ8BYY4 Gm30023-201ENSMUST00000197970 889 ntBASIC25.95■■□□□ 1.74
Ttc39bQ8BYY4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ttc39bQ8BYY4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Ttc39bQ8BYY4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ttc39bQ8BYY4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ttc39bQ8BYY4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.92■■□□□ 1.74
Ttc39bQ8BYY4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ttc39bQ8BYY4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ttc39bQ8BYY4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ttc39bQ8BYY4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Ttc39bQ8BYY4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ttc39bQ8BYY4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.89■■□□□ 1.74
Ttc39bQ8BYY4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Ttc39bQ8BYY4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ttc39bQ8BYY4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ttc39bQ8BYY4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ttc39bQ8BYY4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.88■■□□□ 1.73
Ttc39bQ8BYY4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ttc39bQ8BYY4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ttc39bQ8BYY4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ttc39bQ8BYY4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ttc39bQ8BYY4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ttc39bQ8BYY4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ttc39bQ8BYY4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ttc39bQ8BYY4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Ttc39bQ8BYY4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ttc39bQ8BYY4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.82■■□□□ 1.72
Ttc39bQ8BYY4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ttc39bQ8BYY4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ttc39bQ8BYY4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ttc39bQ8BYY4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ttc39bQ8BYY4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ttc39bQ8BYY4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.79■■□□□ 1.72
Ttc39bQ8BYY4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ttc39bQ8BYY4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ttc39bQ8BYY4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Ttc39bQ8BYY4 Particl-201ENSMUST00000205370 1560 ntBASIC25.78■■□□□ 1.72
Ttc39bQ8BYY4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ttc39bQ8BYY4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.75■■□□□ 1.71
Ttc39bQ8BYY4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ttc39bQ8BYY4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ttc39bQ8BYY4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.73■■□□□ 1.71
Ttc39bQ8BYY4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
Ttc39bQ8BYY4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.72■■□□□ 1.71
Ttc39bQ8BYY4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ttc39bQ8BYY4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ttc39bQ8BYY4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ttc39bQ8BYY4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
Ttc39bQ8BYY4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.69■■□□□ 1.7
Ttc39bQ8BYY4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ttc39bQ8BYY4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.68■■□□□ 1.7
Ttc39bQ8BYY4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ttc39bQ8BYY4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ttc39bQ8BYY4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.67■■□□□ 1.7
Ttc39bQ8BYY4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ttc39bQ8BYY4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ttc39bQ8BYY4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ttc39bQ8BYY4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ttc39bQ8BYY4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.65■■□□□ 1.7
Ttc39bQ8BYY4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ttc39bQ8BYY4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ttc39bQ8BYY4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ttc39bQ8BYY4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ttc39bQ8BYY4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ttc39bQ8BYY4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ttc39bQ8BYY4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.62■■□□□ 1.69
Ttc39bQ8BYY4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ttc39bQ8BYY4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Ttc39bQ8BYY4 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.61■■□□□ 1.69
Ttc39bQ8BYY4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.61■■□□□ 1.69
Ttc39bQ8BYY4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ttc39bQ8BYY4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ttc39bQ8BYY4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ttc39bQ8BYY4 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.6■■□□□ 1.69
Ttc39bQ8BYY4 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.6■■□□□ 1.69
Ttc39bQ8BYY4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ttc39bQ8BYY4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ttc39bQ8BYY4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ttc39bQ8BYY4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ttc39bQ8BYY4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ttc39bQ8BYY4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Ttc39bQ8BYY4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.56■■□□□ 1.68
Ttc39bQ8BYY4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ttc39bQ8BYY4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.55■■□□□ 1.68
Ttc39bQ8BYY4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ttc39bQ8BYY4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ttc39bQ8BYY4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Ttc39bQ8BYY4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Ttc39bQ8BYY4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ttc39bQ8BYY4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ttc39bQ8BYY4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
Ttc39bQ8BYY4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ttc39bQ8BYY4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Ttc39bQ8BYY4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms