Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Lcmt2Q8BYR1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Lcmt2Q8BYR1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.22■■□□□ 1.15
Lcmt2Q8BYR1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lcmt2Q8BYR1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.22■■□□□ 1.15
Lcmt2Q8BYR1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lcmt2Q8BYR1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lcmt2Q8BYR1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lcmt2Q8BYR1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lcmt2Q8BYR1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Lcmt2Q8BYR1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lcmt2Q8BYR1 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.2■■□□□ 1.14
Lcmt2Q8BYR1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
Lcmt2Q8BYR1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Lcmt2Q8BYR1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Lcmt2Q8BYR1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.19■■□□□ 1.14
Lcmt2Q8BYR1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lcmt2Q8BYR1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Lcmt2Q8BYR1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.19■■□□□ 1.14
Lcmt2Q8BYR1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.18■■□□□ 1.14
Lcmt2Q8BYR1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lcmt2Q8BYR1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lcmt2Q8BYR1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Lcmt2Q8BYR1 Gm24970-201ENSMUST00000175582 82 ntBASIC22.17■■□□□ 1.14
Lcmt2Q8BYR1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.17■■□□□ 1.14
Lcmt2Q8BYR1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lcmt2Q8BYR1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lcmt2Q8BYR1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Lcmt2Q8BYR1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Lcmt2Q8BYR1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lcmt2Q8BYR1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Lcmt2Q8BYR1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lcmt2Q8BYR1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lcmt2Q8BYR1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lcmt2Q8BYR1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Lcmt2Q8BYR1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Lcmt2Q8BYR1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Lcmt2Q8BYR1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lcmt2Q8BYR1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lcmt2Q8BYR1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lcmt2Q8BYR1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.12■■□□□ 1.13
Lcmt2Q8BYR1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lcmt2Q8BYR1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.12■■□□□ 1.13
Lcmt2Q8BYR1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lcmt2Q8BYR1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
Lcmt2Q8BYR1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lcmt2Q8BYR1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.11■■□□□ 1.13
Lcmt2Q8BYR1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lcmt2Q8BYR1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Lcmt2Q8BYR1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lcmt2Q8BYR1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lcmt2Q8BYR1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lcmt2Q8BYR1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lcmt2Q8BYR1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Lcmt2Q8BYR1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.07■■□□□ 1.12
Lcmt2Q8BYR1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lcmt2Q8BYR1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Lcmt2Q8BYR1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.07■■□□□ 1.12
Lcmt2Q8BYR1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lcmt2Q8BYR1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lcmt2Q8BYR1 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.06■■□□□ 1.12
Lcmt2Q8BYR1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lcmt2Q8BYR1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lcmt2Q8BYR1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lcmt2Q8BYR1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lcmt2Q8BYR1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lcmt2Q8BYR1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lcmt2Q8BYR1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lcmt2Q8BYR1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Lcmt2Q8BYR1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lcmt2Q8BYR1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Lcmt2Q8BYR1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Lcmt2Q8BYR1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lcmt2Q8BYR1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Lcmt2Q8BYR1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22■■□□□ 1.11
Lcmt2Q8BYR1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lcmt2Q8BYR1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.99■■□□□ 1.11
Lcmt2Q8BYR1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Lcmt2Q8BYR1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lcmt2Q8BYR1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lcmt2Q8BYR1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Lcmt2Q8BYR1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lcmt2Q8BYR1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lcmt2Q8BYR1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
Lcmt2Q8BYR1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lcmt2Q8BYR1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Lcmt2Q8BYR1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lcmt2Q8BYR1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Lcmt2Q8BYR1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Lcmt2Q8BYR1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lcmt2Q8BYR1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lcmt2Q8BYR1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lcmt2Q8BYR1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Lcmt2Q8BYR1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.95■■□□□ 1.1
Lcmt2Q8BYR1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lcmt2Q8BYR1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lcmt2Q8BYR1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lcmt2Q8BYR1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Lcmt2Q8BYR1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.93■■□□□ 1.1
Lcmt2Q8BYR1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms