Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm9397-201ENSMUST00000200125 605 ntBASIC22.88■■□□□ 1.25
Cpne3Q8BT60 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.88■■□□□ 1.25
Cpne3Q8BT60 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cpne3Q8BT60 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cpne3Q8BT60 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Cpne3Q8BT60 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
Cpne3Q8BT60 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.87■■□□□ 1.25
Cpne3Q8BT60 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Cpne3Q8BT60 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cpne3Q8BT60 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cpne3Q8BT60 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.86■■□□□ 1.25
Cpne3Q8BT60 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cpne3Q8BT60 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cpne3Q8BT60 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cpne3Q8BT60 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cpne3Q8BT60 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cpne3Q8BT60 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cpne3Q8BT60 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cpne3Q8BT60 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cpne3Q8BT60 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Cpne3Q8BT60 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.81■■□□□ 1.24
Cpne3Q8BT60 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.8■■□□□ 1.24
Cpne3Q8BT60 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cpne3Q8BT60 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cpne3Q8BT60 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Cpne3Q8BT60 Gm24970-201ENSMUST00000175582 82 ntBASIC22.8■■□□□ 1.24
Cpne3Q8BT60 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cpne3Q8BT60 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cpne3Q8BT60 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.79■■□□□ 1.24
Cpne3Q8BT60 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cpne3Q8BT60 Gm45855-201ENSMUST00000212546 880 ntBASIC22.79■■□□□ 1.24
Cpne3Q8BT60 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.79■■□□□ 1.24
Cpne3Q8BT60 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cpne3Q8BT60 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cpne3Q8BT60 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cpne3Q8BT60 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cpne3Q8BT60 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cpne3Q8BT60 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cpne3Q8BT60 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cpne3Q8BT60 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Cpne3Q8BT60 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.76■■□□□ 1.23
Cpne3Q8BT60 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.75■■□□□ 1.23
Cpne3Q8BT60 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.74■■□□□ 1.23
Cpne3Q8BT60 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cpne3Q8BT60 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.74■■□□□ 1.23
Cpne3Q8BT60 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cpne3Q8BT60 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cpne3Q8BT60 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Cpne3Q8BT60 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cpne3Q8BT60 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Cpne3Q8BT60 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cpne3Q8BT60 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Cpne3Q8BT60 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.71■■□□□ 1.23
Cpne3Q8BT60 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cpne3Q8BT60 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cpne3Q8BT60 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cpne3Q8BT60 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Cpne3Q8BT60 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cpne3Q8BT60 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cpne3Q8BT60 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cpne3Q8BT60 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cpne3Q8BT60 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cpne3Q8BT60 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Cpne3Q8BT60 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cpne3Q8BT60 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cpne3Q8BT60 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Cpne3Q8BT60 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cpne3Q8BT60 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cpne3Q8BT60 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cpne3Q8BT60 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Cpne3Q8BT60 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
Cpne3Q8BT60 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cpne3Q8BT60 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cpne3Q8BT60 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Cpne3Q8BT60 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.66■■□□□ 1.22
Cpne3Q8BT60 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cpne3Q8BT60 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cpne3Q8BT60 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Cpne3Q8BT60 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cpne3Q8BT60 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.65■■□□□ 1.22
Cpne3Q8BT60 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.65■■□□□ 1.22
Cpne3Q8BT60 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.22
Cpne3Q8BT60 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Cpne3Q8BT60 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cpne3Q8BT60 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cpne3Q8BT60 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Cpne3Q8BT60 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Cpne3Q8BT60 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cpne3Q8BT60 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Cpne3Q8BT60 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
Cpne3Q8BT60 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cpne3Q8BT60 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Cpne3Q8BT60 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cpne3Q8BT60 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cpne3Q8BT60 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cpne3Q8BT60 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Cpne3Q8BT60 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cpne3Q8BT60 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cpne3Q8BT60 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cpne3Q8BT60 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms