Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.25■■□□□ 1.47
Suds3Q8BR65 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Suds3Q8BR65 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Suds3Q8BR65 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Suds3Q8BR65 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Suds3Q8BR65 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Suds3Q8BR65 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Suds3Q8BR65 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Suds3Q8BR65 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Suds3Q8BR65 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.22■■□□□ 1.47
Suds3Q8BR65 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Suds3Q8BR65 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Suds3Q8BR65 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Suds3Q8BR65 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Suds3Q8BR65 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Suds3Q8BR65 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Suds3Q8BR65 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.18■■□□□ 1.46
Suds3Q8BR65 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
Suds3Q8BR65 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Suds3Q8BR65 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Suds3Q8BR65 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.18■■□□□ 1.46
Suds3Q8BR65 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Suds3Q8BR65 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Suds3Q8BR65 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.16■■□□□ 1.46
Suds3Q8BR65 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Suds3Q8BR65 Gm6821-201ENSMUST00000107540 542 ntBASIC24.15■■□□□ 1.46
Suds3Q8BR65 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Suds3Q8BR65 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Suds3Q8BR65 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Suds3Q8BR65 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Suds3Q8BR65 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Suds3Q8BR65 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Suds3Q8BR65 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Suds3Q8BR65 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Suds3Q8BR65 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Suds3Q8BR65 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Suds3Q8BR65 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Suds3Q8BR65 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Suds3Q8BR65 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Suds3Q8BR65 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Suds3Q8BR65 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Suds3Q8BR65 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Suds3Q8BR65 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Suds3Q8BR65 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.44
Suds3Q8BR65 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Suds3Q8BR65 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Suds3Q8BR65 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Suds3Q8BR65 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Suds3Q8BR65 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Suds3Q8BR65 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.05■■□□□ 1.44
Suds3Q8BR65 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.05■■□□□ 1.44
Suds3Q8BR65 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Suds3Q8BR65 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Suds3Q8BR65 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Suds3Q8BR65 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Suds3Q8BR65 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Suds3Q8BR65 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Suds3Q8BR65 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Suds3Q8BR65 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24■■□□□ 1.43
Suds3Q8BR65 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Suds3Q8BR65 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Suds3Q8BR65 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Suds3Q8BR65 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Suds3Q8BR65 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Suds3Q8BR65 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Suds3Q8BR65 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Suds3Q8BR65 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Suds3Q8BR65 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Suds3Q8BR65 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Suds3Q8BR65 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Suds3Q8BR65 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Suds3Q8BR65 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Suds3Q8BR65 Gm8503-201ENSMUST00000118131 455 ntBASIC23.96■■□□□ 1.43
Suds3Q8BR65 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Suds3Q8BR65 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Suds3Q8BR65 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.95■■□□□ 1.43
Suds3Q8BR65 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.95■■□□□ 1.42
Suds3Q8BR65 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Suds3Q8BR65 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Suds3Q8BR65 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.94■■□□□ 1.42
Suds3Q8BR65 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Suds3Q8BR65 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Suds3Q8BR65 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Suds3Q8BR65 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.93■■□□□ 1.42
Suds3Q8BR65 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.93■■□□□ 1.42
Suds3Q8BR65 Nkain2-201ENSMUST00000092602 558 ntBASIC23.93■■□□□ 1.42
Suds3Q8BR65 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Suds3Q8BR65 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Suds3Q8BR65 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.91■■□□□ 1.42
Suds3Q8BR65 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms