Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.25■■□□□ 1.47
Suds3Q8BR65 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Suds3Q8BR65 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Suds3Q8BR65 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Suds3Q8BR65 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Suds3Q8BR65 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Suds3Q8BR65 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Suds3Q8BR65 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Suds3Q8BR65 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Suds3Q8BR65 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.22■■□□□ 1.47
Suds3Q8BR65 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Suds3Q8BR65 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Suds3Q8BR65 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Suds3Q8BR65 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Suds3Q8BR65 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Suds3Q8BR65 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Suds3Q8BR65 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.18■■□□□ 1.46
Suds3Q8BR65 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
Suds3Q8BR65 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Suds3Q8BR65 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Suds3Q8BR65 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.18■■□□□ 1.46
Suds3Q8BR65 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Suds3Q8BR65 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Suds3Q8BR65 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.16■■□□□ 1.46
Suds3Q8BR65 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Suds3Q8BR65 Gm6821-201ENSMUST00000107540 542 ntBASIC24.15■■□□□ 1.46
Suds3Q8BR65 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Suds3Q8BR65 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Suds3Q8BR65 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Suds3Q8BR65 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Suds3Q8BR65 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Suds3Q8BR65 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Suds3Q8BR65 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Suds3Q8BR65 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Suds3Q8BR65 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Suds3Q8BR65 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Suds3Q8BR65 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Suds3Q8BR65 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Suds3Q8BR65 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Suds3Q8BR65 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Suds3Q8BR65 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Suds3Q8BR65 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Suds3Q8BR65 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Suds3Q8BR65 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.44
Suds3Q8BR65 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Suds3Q8BR65 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Suds3Q8BR65 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Suds3Q8BR65 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.06■■□□□ 1.44
Suds3Q8BR65 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Suds3Q8BR65 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Suds3Q8BR65 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.05■■□□□ 1.44
Suds3Q8BR65 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.05■■□□□ 1.44
Suds3Q8BR65 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Suds3Q8BR65 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Suds3Q8BR65 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Suds3Q8BR65 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Suds3Q8BR65 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Suds3Q8BR65 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Suds3Q8BR65 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Suds3Q8BR65 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24■■□□□ 1.43
Suds3Q8BR65 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Suds3Q8BR65 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Suds3Q8BR65 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Suds3Q8BR65 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Suds3Q8BR65 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Suds3Q8BR65 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Suds3Q8BR65 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Suds3Q8BR65 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Suds3Q8BR65 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Suds3Q8BR65 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Suds3Q8BR65 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Suds3Q8BR65 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Suds3Q8BR65 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Suds3Q8BR65 Gm8503-201ENSMUST00000118131 455 ntBASIC23.96■■□□□ 1.43
Suds3Q8BR65 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Suds3Q8BR65 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Suds3Q8BR65 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.95■■□□□ 1.43
Suds3Q8BR65 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.95■■□□□ 1.42
Suds3Q8BR65 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Suds3Q8BR65 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Suds3Q8BR65 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.94■■□□□ 1.42
Suds3Q8BR65 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Suds3Q8BR65 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Suds3Q8BR65 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Suds3Q8BR65 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.93■■□□□ 1.42
Suds3Q8BR65 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.93■■□□□ 1.42
Suds3Q8BR65 Nkain2-201ENSMUST00000092602 558 ntBASIC23.93■■□□□ 1.42
Suds3Q8BR65 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Suds3Q8BR65 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Suds3Q8BR65 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.91■■□□□ 1.42
Suds3Q8BR65 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Suds3Q8BR65 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms