Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nhlrc1Q8BR37 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nhlrc1Q8BR37 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.42■□□□□ 0.54
Nhlrc1Q8BR37 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.42■□□□□ 0.54
Nhlrc1Q8BR37 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nhlrc1Q8BR37 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.41■□□□□ 0.54
Nhlrc1Q8BR37 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nhlrc1Q8BR37 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhlrc1Q8BR37 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nhlrc1Q8BR37 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nhlrc1Q8BR37 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nhlrc1Q8BR37 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nhlrc1Q8BR37 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nhlrc1Q8BR37 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nhlrc1Q8BR37 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.37■□□□□ 0.53
Nhlrc1Q8BR37 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.37■□□□□ 0.53
Nhlrc1Q8BR37 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhlrc1Q8BR37 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nhlrc1Q8BR37 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhlrc1Q8BR37 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.36■□□□□ 0.53
Nhlrc1Q8BR37 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.36■□□□□ 0.53
Nhlrc1Q8BR37 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhlrc1Q8BR37 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nhlrc1Q8BR37 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.35■□□□□ 0.53
Nhlrc1Q8BR37 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nhlrc1Q8BR37 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhlrc1Q8BR37 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.35■□□□□ 0.53
Nhlrc1Q8BR37 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhlrc1Q8BR37 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhlrc1Q8BR37 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.34■□□□□ 0.53
Nhlrc1Q8BR37 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhlrc1Q8BR37 Particl-201ENSMUST00000205370 1560 ntBASIC18.33■□□□□ 0.52
Nhlrc1Q8BR37 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nhlrc1Q8BR37 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nhlrc1Q8BR37 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 Gm30023-201ENSMUST00000197970 889 ntBASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nhlrc1Q8BR37 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhlrc1Q8BR37 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Nhlrc1Q8BR37 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.29■□□□□ 0.52
Nhlrc1Q8BR37 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhlrc1Q8BR37 Mir6538-201ENSMUST00000183713 110 ntBASIC18.28■□□□□ 0.52
Nhlrc1Q8BR37 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Nhlrc1Q8BR37 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nhlrc1Q8BR37 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhlrc1Q8BR37 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nhlrc1Q8BR37 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhlrc1Q8BR37 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhlrc1Q8BR37 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nhlrc1Q8BR37 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nhlrc1Q8BR37 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhlrc1Q8BR37 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nhlrc1Q8BR37 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.24■□□□□ 0.51
Nhlrc1Q8BR37 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhlrc1Q8BR37 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhlrc1Q8BR37 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhlrc1Q8BR37 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhlrc1Q8BR37 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhlrc1Q8BR37 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhlrc1Q8BR37 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhlrc1Q8BR37 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nhlrc1Q8BR37 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nhlrc1Q8BR37 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Nhlrc1Q8BR37 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nhlrc1Q8BR37 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nhlrc1Q8BR37 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nhlrc1Q8BR37 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhlrc1Q8BR37 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhlrc1Q8BR37 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhlrc1Q8BR37 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhlrc1Q8BR37 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nhlrc1Q8BR37 Gm6311-201ENSMUST00000073790 878 ntBASIC18.19■□□□□ 0.5
Nhlrc1Q8BR37 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nhlrc1Q8BR37 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.19■□□□□ 0.5
Nhlrc1Q8BR37 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nhlrc1Q8BR37 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nhlrc1Q8BR37 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nhlrc1Q8BR37 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nhlrc1Q8BR37 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nhlrc1Q8BR37 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nhlrc1Q8BR37 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhlrc1Q8BR37 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nhlrc1Q8BR37 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.16■□□□□ 0.5
Nhlrc1Q8BR37 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Nhlrc1Q8BR37 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhlrc1Q8BR37 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nhlrc1Q8BR37 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nhlrc1Q8BR37 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nhlrc1Q8BR37 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nhlrc1Q8BR37 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.15■□□□□ 0.5
Nhlrc1Q8BR37 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nhlrc1Q8BR37 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nhlrc1Q8BR37 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms