Protein–RNA interactions for Protein: Q8BGN5

Nipal3, NIPA-like protein 3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipal3Q8BGN5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Nipal3Q8BGN5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.44■■□□□ 1.18
Nipal3Q8BGN5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Nipal3Q8BGN5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nipal3Q8BGN5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nipal3Q8BGN5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nipal3Q8BGN5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nipal3Q8BGN5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nipal3Q8BGN5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Nipal3Q8BGN5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nipal3Q8BGN5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nipal3Q8BGN5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Nipal3Q8BGN5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nipal3Q8BGN5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nipal3Q8BGN5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nipal3Q8BGN5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nipal3Q8BGN5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nipal3Q8BGN5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Nipal3Q8BGN5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nipal3Q8BGN5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nipal3Q8BGN5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Nipal3Q8BGN5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.39■■□□□ 1.17
Nipal3Q8BGN5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nipal3Q8BGN5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nipal3Q8BGN5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nipal3Q8BGN5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Nipal3Q8BGN5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nipal3Q8BGN5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nipal3Q8BGN5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nipal3Q8BGN5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nipal3Q8BGN5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nipal3Q8BGN5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nipal3Q8BGN5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nipal3Q8BGN5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
Nipal3Q8BGN5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Nipal3Q8BGN5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nipal3Q8BGN5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nipal3Q8BGN5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nipal3Q8BGN5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nipal3Q8BGN5 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.34■■□□□ 1.17
Nipal3Q8BGN5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nipal3Q8BGN5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nipal3Q8BGN5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nipal3Q8BGN5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Nipal3Q8BGN5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nipal3Q8BGN5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Nipal3Q8BGN5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Nipal3Q8BGN5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nipal3Q8BGN5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nipal3Q8BGN5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Nipal3Q8BGN5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nipal3Q8BGN5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nipal3Q8BGN5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nipal3Q8BGN5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nipal3Q8BGN5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nipal3Q8BGN5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nipal3Q8BGN5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Nipal3Q8BGN5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Nipal3Q8BGN5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nipal3Q8BGN5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Nipal3Q8BGN5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nipal3Q8BGN5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nipal3Q8BGN5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Nipal3Q8BGN5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Nipal3Q8BGN5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Nipal3Q8BGN5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Nipal3Q8BGN5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nipal3Q8BGN5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nipal3Q8BGN5 Gm6821-201ENSMUST00000107540 542 ntBASIC22.24■■□□□ 1.15
Nipal3Q8BGN5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.24■■□□□ 1.15
Nipal3Q8BGN5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Nipal3Q8BGN5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nipal3Q8BGN5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nipal3Q8BGN5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Nipal3Q8BGN5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Nipal3Q8BGN5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Nipal3Q8BGN5 Nkain2-201ENSMUST00000092602 558 ntBASIC22.22■■□□□ 1.15
Nipal3Q8BGN5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nipal3Q8BGN5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nipal3Q8BGN5 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.21■■□□□ 1.15
Nipal3Q8BGN5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nipal3Q8BGN5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
Nipal3Q8BGN5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Nipal3Q8BGN5 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.2■■□□□ 1.14
Nipal3Q8BGN5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Nipal3Q8BGN5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nipal3Q8BGN5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Nipal3Q8BGN5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nipal3Q8BGN5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nipal3Q8BGN5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.16■■□□□ 1.14
Nipal3Q8BGN5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nipal3Q8BGN5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nipal3Q8BGN5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.14■■□□□ 1.13
Nipal3Q8BGN5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
Nipal3Q8BGN5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.14■■□□□ 1.13
Nipal3Q8BGN5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.14■■□□□ 1.13
Nipal3Q8BGN5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
Nipal3Q8BGN5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nipal3Q8BGN5 Gm8503-201ENSMUST00000118131 455 ntBASIC22.13■■□□□ 1.13
Nipal3Q8BGN5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms