Protein–RNA interactions for Protein: Q8BGI7

Lrrc39, Leucine-rich repeat-containing protein 39, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc39Q8BGI7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Lrrc39Q8BGI7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lrrc39Q8BGI7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lrrc39Q8BGI7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lrrc39Q8BGI7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lrrc39Q8BGI7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lrrc39Q8BGI7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lrrc39Q8BGI7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lrrc39Q8BGI7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Lrrc39Q8BGI7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lrrc39Q8BGI7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lrrc39Q8BGI7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lrrc39Q8BGI7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lrrc39Q8BGI7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.78■■□□□ 1.08
Lrrc39Q8BGI7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lrrc39Q8BGI7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Lrrc39Q8BGI7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Lrrc39Q8BGI7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Lrrc39Q8BGI7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lrrc39Q8BGI7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Lrrc39Q8BGI7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.75■■□□□ 1.07
Lrrc39Q8BGI7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lrrc39Q8BGI7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lrrc39Q8BGI7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lrrc39Q8BGI7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lrrc39Q8BGI7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lrrc39Q8BGI7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Lrrc39Q8BGI7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lrrc39Q8BGI7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lrrc39Q8BGI7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
Lrrc39Q8BGI7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lrrc39Q8BGI7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Lrrc39Q8BGI7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.71■■□□□ 1.07
Lrrc39Q8BGI7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Lrrc39Q8BGI7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Lrrc39Q8BGI7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lrrc39Q8BGI7 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.7■■□□□ 1.06
Lrrc39Q8BGI7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.7■■□□□ 1.06
Lrrc39Q8BGI7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lrrc39Q8BGI7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Lrrc39Q8BGI7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lrrc39Q8BGI7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lrrc39Q8BGI7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lrrc39Q8BGI7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Lrrc39Q8BGI7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.67■■□□□ 1.06
Lrrc39Q8BGI7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lrrc39Q8BGI7 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.66■■□□□ 1.06
Lrrc39Q8BGI7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lrrc39Q8BGI7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.65■■□□□ 1.06
Lrrc39Q8BGI7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.65■■□□□ 1.06
Lrrc39Q8BGI7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lrrc39Q8BGI7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lrrc39Q8BGI7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lrrc39Q8BGI7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lrrc39Q8BGI7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lrrc39Q8BGI7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lrrc39Q8BGI7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lrrc39Q8BGI7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.64■■□□□ 1.05
Lrrc39Q8BGI7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lrrc39Q8BGI7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lrrc39Q8BGI7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lrrc39Q8BGI7 Zfp131-205ENSMUST00000223812 663 ntBASIC21.63■■□□□ 1.05
Lrrc39Q8BGI7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Lrrc39Q8BGI7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lrrc39Q8BGI7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Lrrc39Q8BGI7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Lrrc39Q8BGI7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lrrc39Q8BGI7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.61■■□□□ 1.05
Lrrc39Q8BGI7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lrrc39Q8BGI7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Lrrc39Q8BGI7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lrrc39Q8BGI7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lrrc39Q8BGI7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.58■■□□□ 1.05
Lrrc39Q8BGI7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrc39Q8BGI7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.58■■□□□ 1.05
Lrrc39Q8BGI7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lrrc39Q8BGI7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrc39Q8BGI7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrc39Q8BGI7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrc39Q8BGI7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrc39Q8BGI7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lrrc39Q8BGI7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lrrc39Q8BGI7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Lrrc39Q8BGI7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lrrc39Q8BGI7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lrrc39Q8BGI7 Gm24970-201ENSMUST00000175582 82 ntBASIC21.53■■□□□ 1.04
Lrrc39Q8BGI7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lrrc39Q8BGI7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Lrrc39Q8BGI7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.52■■□□□ 1.04
Lrrc39Q8BGI7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.52■■□□□ 1.04
Lrrc39Q8BGI7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.51■■□□□ 1.03
Lrrc39Q8BGI7 Gm9397-201ENSMUST00000200125 605 ntBASIC21.51■■□□□ 1.03
Lrrc39Q8BGI7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lrrc39Q8BGI7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lrrc39Q8BGI7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lrrc39Q8BGI7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lrrc39Q8BGI7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.5■■□□□ 1.03
Lrrc39Q8BGI7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lrrc39Q8BGI7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.5■■□□□ 1.03
Lrrc39Q8BGI7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms