Protein–RNA interactions for Protein: Q6YI28

2210407C18Rik, EP1, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210407C18RikQ6YI28 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
2210407C18RikQ6YI28 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
2210407C18RikQ6YI28 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
2210407C18RikQ6YI28 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
2210407C18RikQ6YI28 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
2210407C18RikQ6YI28 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
2210407C18RikQ6YI28 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
2210407C18RikQ6YI28 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
2210407C18RikQ6YI28 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
2210407C18RikQ6YI28 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.09■□□□□ 0.97
2210407C18RikQ6YI28 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
2210407C18RikQ6YI28 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
2210407C18RikQ6YI28 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
2210407C18RikQ6YI28 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
2210407C18RikQ6YI28 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
2210407C18RikQ6YI28 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
2210407C18RikQ6YI28 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
2210407C18RikQ6YI28 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
2210407C18RikQ6YI28 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
2210407C18RikQ6YI28 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
2210407C18RikQ6YI28 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
2210407C18RikQ6YI28 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
2210407C18RikQ6YI28 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
2210407C18RikQ6YI28 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
2210407C18RikQ6YI28 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
2210407C18RikQ6YI28 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
2210407C18RikQ6YI28 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
2210407C18RikQ6YI28 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.03■□□□□ 0.96
2210407C18RikQ6YI28 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
2210407C18RikQ6YI28 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.03■□□□□ 0.96
2210407C18RikQ6YI28 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
2210407C18RikQ6YI28 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
2210407C18RikQ6YI28 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
2210407C18RikQ6YI28 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.02■□□□□ 0.96
2210407C18RikQ6YI28 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
2210407C18RikQ6YI28 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
2210407C18RikQ6YI28 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
2210407C18RikQ6YI28 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.01■□□□□ 0.95
2210407C18RikQ6YI28 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
2210407C18RikQ6YI28 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21■□□□□ 0.95
2210407C18RikQ6YI28 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.99■□□□□ 0.95
2210407C18RikQ6YI28 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
2210407C18RikQ6YI28 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
2210407C18RikQ6YI28 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
2210407C18RikQ6YI28 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
2210407C18RikQ6YI28 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
2210407C18RikQ6YI28 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
2210407C18RikQ6YI28 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
2210407C18RikQ6YI28 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.97■□□□□ 0.95
2210407C18RikQ6YI28 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
2210407C18RikQ6YI28 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
2210407C18RikQ6YI28 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
2210407C18RikQ6YI28 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
2210407C18RikQ6YI28 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
2210407C18RikQ6YI28 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
2210407C18RikQ6YI28 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
2210407C18RikQ6YI28 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
2210407C18RikQ6YI28 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
2210407C18RikQ6YI28 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
2210407C18RikQ6YI28 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
2210407C18RikQ6YI28 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
2210407C18RikQ6YI28 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
2210407C18RikQ6YI28 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
2210407C18RikQ6YI28 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.93■□□□□ 0.94
2210407C18RikQ6YI28 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
2210407C18RikQ6YI28 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
2210407C18RikQ6YI28 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
2210407C18RikQ6YI28 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
2210407C18RikQ6YI28 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
2210407C18RikQ6YI28 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
2210407C18RikQ6YI28 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
2210407C18RikQ6YI28 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
2210407C18RikQ6YI28 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
2210407C18RikQ6YI28 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
2210407C18RikQ6YI28 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
2210407C18RikQ6YI28 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
2210407C18RikQ6YI28 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
2210407C18RikQ6YI28 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
2210407C18RikQ6YI28 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.87■□□□□ 0.93
2210407C18RikQ6YI28 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
2210407C18RikQ6YI28 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
2210407C18RikQ6YI28 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
2210407C18RikQ6YI28 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.85■□□□□ 0.93
2210407C18RikQ6YI28 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
2210407C18RikQ6YI28 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
2210407C18RikQ6YI28 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.85■□□□□ 0.93
2210407C18RikQ6YI28 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
2210407C18RikQ6YI28 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
2210407C18RikQ6YI28 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
2210407C18RikQ6YI28 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
2210407C18RikQ6YI28 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
2210407C18RikQ6YI28 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
2210407C18RikQ6YI28 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
2210407C18RikQ6YI28 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
2210407C18RikQ6YI28 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
2210407C18RikQ6YI28 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
2210407C18RikQ6YI28 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
2210407C18RikQ6YI28 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
2210407C18RikQ6YI28 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
2210407C18RikQ6YI28 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms