Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SspnQ62147 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SspnQ62147 Gm9397-201ENSMUST00000200125 605 ntBASIC19.8■□□□□ 0.76
SspnQ62147 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.8■□□□□ 0.76
SspnQ62147 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SspnQ62147 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SspnQ62147 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SspnQ62147 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.79■□□□□ 0.76
SspnQ62147 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.78■□□□□ 0.76
SspnQ62147 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SspnQ62147 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SspnQ62147 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SspnQ62147 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.76■□□□□ 0.75
SspnQ62147 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SspnQ62147 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SspnQ62147 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SspnQ62147 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SspnQ62147 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SspnQ62147 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SspnQ62147 Gm45855-201ENSMUST00000212546 880 ntBASIC19.75■□□□□ 0.75
SspnQ62147 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SspnQ62147 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SspnQ62147 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SspnQ62147 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SspnQ62147 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SspnQ62147 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SspnQ62147 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SspnQ62147 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SspnQ62147 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SspnQ62147 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SspnQ62147 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SspnQ62147 Gm24970-201ENSMUST00000175582 82 ntBASIC19.72■□□□□ 0.75
SspnQ62147 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.72■□□□□ 0.75
SspnQ62147 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SspnQ62147 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SspnQ62147 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SspnQ62147 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.7■□□□□ 0.74
SspnQ62147 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SspnQ62147 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SspnQ62147 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SspnQ62147 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SspnQ62147 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SspnQ62147 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SspnQ62147 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.67■□□□□ 0.74
SspnQ62147 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SspnQ62147 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SspnQ62147 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SspnQ62147 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.65■□□□□ 0.74
SspnQ62147 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SspnQ62147 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SspnQ62147 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SspnQ62147 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SspnQ62147 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.64■□□□□ 0.73
SspnQ62147 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.64■□□□□ 0.73
SspnQ62147 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SspnQ62147 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SspnQ62147 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SspnQ62147 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SspnQ62147 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SspnQ62147 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SspnQ62147 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SspnQ62147 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SspnQ62147 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SspnQ62147 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SspnQ62147 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SspnQ62147 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.61■□□□□ 0.73
SspnQ62147 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SspnQ62147 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SspnQ62147 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SspnQ62147 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SspnQ62147 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SspnQ62147 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
SspnQ62147 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.58■□□□□ 0.72
SspnQ62147 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SspnQ62147 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SspnQ62147 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SspnQ62147 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SspnQ62147 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.56■□□□□ 0.72
SspnQ62147 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SspnQ62147 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SspnQ62147 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SspnQ62147 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SspnQ62147 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SspnQ62147 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SspnQ62147 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SspnQ62147 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SspnQ62147 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SspnQ62147 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SspnQ62147 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SspnQ62147 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SspnQ62147 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SspnQ62147 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SspnQ62147 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SspnQ62147 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.51■□□□□ 0.71
SspnQ62147 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SspnQ62147 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SspnQ62147 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SspnQ62147 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SspnQ62147 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SspnQ62147 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms