Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Foxf1Q61080 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Foxf1Q61080 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxf1Q61080 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxf1Q61080 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxf1Q61080 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Foxf1Q61080 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Foxf1Q61080 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Foxf1Q61080 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Foxf1Q61080 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxf1Q61080 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Foxf1Q61080 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.05■□□□□ 0.8
Foxf1Q61080 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxf1Q61080 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Foxf1Q61080 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.05■□□□□ 0.8
Foxf1Q61080 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Foxf1Q61080 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Foxf1Q61080 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.03■□□□□ 0.8
Foxf1Q61080 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.03■□□□□ 0.8
Foxf1Q61080 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxf1Q61080 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.02■□□□□ 0.8
Foxf1Q61080 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Foxf1Q61080 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Foxf1Q61080 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxf1Q61080 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxf1Q61080 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Foxf1Q61080 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Foxf1Q61080 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxf1Q61080 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxf1Q61080 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Foxf1Q61080 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Foxf1Q61080 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxf1Q61080 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Foxf1Q61080 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxf1Q61080 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
Foxf1Q61080 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxf1Q61080 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxf1Q61080 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxf1Q61080 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxf1Q61080 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxf1Q61080 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxf1Q61080 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Foxf1Q61080 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxf1Q61080 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxf1Q61080 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxf1Q61080 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.95■□□□□ 0.78
Foxf1Q61080 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Foxf1Q61080 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxf1Q61080 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxf1Q61080 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Foxf1Q61080 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Foxf1Q61080 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxf1Q61080 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxf1Q61080 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxf1Q61080 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Foxf1Q61080 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.9■□□□□ 0.78
Foxf1Q61080 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Foxf1Q61080 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Foxf1Q61080 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Foxf1Q61080 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Foxf1Q61080 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Foxf1Q61080 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Foxf1Q61080 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Foxf1Q61080 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Foxf1Q61080 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Foxf1Q61080 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Foxf1Q61080 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.86■□□□□ 0.77
Foxf1Q61080 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Foxf1Q61080 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.86■□□□□ 0.77
Foxf1Q61080 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Foxf1Q61080 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Foxf1Q61080 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Foxf1Q61080 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Foxf1Q61080 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Foxf1Q61080 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Foxf1Q61080 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Foxf1Q61080 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Foxf1Q61080 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Foxf1Q61080 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Foxf1Q61080 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Foxf1Q61080 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxf1Q61080 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Foxf1Q61080 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxf1Q61080 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Foxf1Q61080 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxf1Q61080 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Foxf1Q61080 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Foxf1Q61080 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.79■□□□□ 0.76
Foxf1Q61080 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.79■□□□□ 0.76
Foxf1Q61080 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Foxf1Q61080 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxf1Q61080 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Foxf1Q61080 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxf1Q61080 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Foxf1Q61080 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.78■□□□□ 0.76
Foxf1Q61080 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxf1Q61080 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxf1Q61080 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxf1Q61080 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Foxf1Q61080 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms