Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.77■□□□□ 0.92
Gm12253Q5NC48 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
Gm12253Q5NC48 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm12253Q5NC48 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm12253Q5NC48 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.75■□□□□ 0.91
Gm12253Q5NC48 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm12253Q5NC48 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm12253Q5NC48 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm12253Q5NC48 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm12253Q5NC48 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm12253Q5NC48 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm12253Q5NC48 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Gm12253Q5NC48 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm12253Q5NC48 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm12253Q5NC48 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm12253Q5NC48 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm12253Q5NC48 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.71■□□□□ 0.91
Gm12253Q5NC48 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm12253Q5NC48 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm12253Q5NC48 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm12253Q5NC48 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Gm12253Q5NC48 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm12253Q5NC48 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm12253Q5NC48 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm12253Q5NC48 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm12253Q5NC48 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.68■□□□□ 0.9
Gm12253Q5NC48 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.68■□□□□ 0.9
Gm12253Q5NC48 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm12253Q5NC48 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm12253Q5NC48 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Gm12253Q5NC48 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm12253Q5NC48 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.66■□□□□ 0.9
Gm12253Q5NC48 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm12253Q5NC48 Gm11599-201ENSMUST00000118720 878 ntBASIC20.64■□□□□ 0.89
Gm12253Q5NC48 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.64■□□□□ 0.89
Gm12253Q5NC48 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.64■□□□□ 0.89
Gm12253Q5NC48 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm12253Q5NC48 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm12253Q5NC48 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm12253Q5NC48 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.63■□□□□ 0.89
Gm12253Q5NC48 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm12253Q5NC48 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.63■□□□□ 0.89
Gm12253Q5NC48 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm12253Q5NC48 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm12253Q5NC48 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm12253Q5NC48 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm12253Q5NC48 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm12253Q5NC48 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.61■□□□□ 0.89
Gm12253Q5NC48 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.61■□□□□ 0.89
Gm12253Q5NC48 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm12253Q5NC48 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gm12253Q5NC48 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm12253Q5NC48 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm12253Q5NC48 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Gm12253Q5NC48 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm12253Q5NC48 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm12253Q5NC48 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12253Q5NC48 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Gm12253Q5NC48 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12253Q5NC48 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12253Q5NC48 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm12253Q5NC48 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm12253Q5NC48 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm12253Q5NC48 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm12253Q5NC48 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
Gm12253Q5NC48 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm12253Q5NC48 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm12253Q5NC48 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm12253Q5NC48 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm12253Q5NC48 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Gm12253Q5NC48 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm12253Q5NC48 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm12253Q5NC48 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm12253Q5NC48 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm12253Q5NC48 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm12253Q5NC48 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm12253Q5NC48 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm12253Q5NC48 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm12253Q5NC48 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm12253Q5NC48 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.49■□□□□ 0.87
Gm12253Q5NC48 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm12253Q5NC48 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm12253Q5NC48 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm12253Q5NC48 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm12253Q5NC48 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm12253Q5NC48 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Gm12253Q5NC48 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm12253Q5NC48 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm12253Q5NC48 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm12253Q5NC48 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12253Q5NC48 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.46■□□□□ 0.87
Gm12253Q5NC48 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12253Q5NC48 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12253Q5NC48 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12253Q5NC48 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Gm12253Q5NC48 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12253Q5NC48 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm12253Q5NC48 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm12253Q5NC48 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Gm12253Q5NC48 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms