Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rnf20Q5DTM8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
Rnf20Q5DTM8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rnf20Q5DTM8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Rnf20Q5DTM8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.47■■■□□ 2.15
Rnf20Q5DTM8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Rnf20Q5DTM8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Rnf20Q5DTM8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Rnf20Q5DTM8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rnf20Q5DTM8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Rnf20Q5DTM8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rnf20Q5DTM8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Rnf20Q5DTM8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rnf20Q5DTM8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Rnf20Q5DTM8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rnf20Q5DTM8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
Rnf20Q5DTM8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rnf20Q5DTM8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Rnf20Q5DTM8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Rnf20Q5DTM8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rnf20Q5DTM8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rnf20Q5DTM8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.39■■■□□ 2.14
Rnf20Q5DTM8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Rnf20Q5DTM8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rnf20Q5DTM8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rnf20Q5DTM8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rnf20Q5DTM8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Rnf20Q5DTM8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rnf20Q5DTM8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.35■■■□□ 2.13
Rnf20Q5DTM8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Rnf20Q5DTM8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Rnf20Q5DTM8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC28.33■■■□□ 2.13
Rnf20Q5DTM8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
Rnf20Q5DTM8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rnf20Q5DTM8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rnf20Q5DTM8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rnf20Q5DTM8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rnf20Q5DTM8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Rnf20Q5DTM8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rnf20Q5DTM8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.28■■■□□ 2.12
Rnf20Q5DTM8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rnf20Q5DTM8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rnf20Q5DTM8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rnf20Q5DTM8 Gm30023-201ENSMUST00000197970 889 ntBASIC28.27■■■□□ 2.12
Rnf20Q5DTM8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Rnf20Q5DTM8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rnf20Q5DTM8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Rnf20Q5DTM8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.26■■■□□ 2.11
Rnf20Q5DTM8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Rnf20Q5DTM8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Rnf20Q5DTM8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rnf20Q5DTM8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rnf20Q5DTM8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rnf20Q5DTM8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Rnf20Q5DTM8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.24■■■□□ 2.11
Rnf20Q5DTM8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rnf20Q5DTM8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.23■■■□□ 2.11
Rnf20Q5DTM8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rnf20Q5DTM8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Rnf20Q5DTM8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rnf20Q5DTM8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Rnf20Q5DTM8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Rnf20Q5DTM8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rnf20Q5DTM8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.21■■■□□ 2.11
Rnf20Q5DTM8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rnf20Q5DTM8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.21■■■□□ 2.11
Rnf20Q5DTM8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rnf20Q5DTM8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rnf20Q5DTM8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.2■■■□□ 2.1
Rnf20Q5DTM8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rnf20Q5DTM8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rnf20Q5DTM8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Rnf20Q5DTM8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.2■■■□□ 2.1
Rnf20Q5DTM8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Rnf20Q5DTM8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rnf20Q5DTM8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rnf20Q5DTM8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rnf20Q5DTM8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rnf20Q5DTM8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Rnf20Q5DTM8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rnf20Q5DTM8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rnf20Q5DTM8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Rnf20Q5DTM8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Rnf20Q5DTM8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rnf20Q5DTM8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rnf20Q5DTM8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rnf20Q5DTM8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Rnf20Q5DTM8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rnf20Q5DTM8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rnf20Q5DTM8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
Rnf20Q5DTM8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Rnf20Q5DTM8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.13■■■□□ 2.09
Rnf20Q5DTM8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Rnf20Q5DTM8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf20Q5DTM8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf20Q5DTM8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
Rnf20Q5DTM8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf20Q5DTM8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf20Q5DTM8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.1■■■□□ 2.09
Rnf20Q5DTM8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms