Protein–RNA interactions for Protein: Q3V2K9

Gm10840, Predicted gene 10840 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10840Q3V2K9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10840Q3V2K9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10840Q3V2K9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Gm10840Q3V2K9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm10840Q3V2K9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm10840Q3V2K9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.91■□□□□ 0.78
Gm10840Q3V2K9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm10840Q3V2K9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm10840Q3V2K9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Gm10840Q3V2K9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm10840Q3V2K9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm10840Q3V2K9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm10840Q3V2K9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Gm10840Q3V2K9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm10840Q3V2K9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.87■□□□□ 0.77
Gm10840Q3V2K9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm10840Q3V2K9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Gm10840Q3V2K9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm10840Q3V2K9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm10840Q3V2K9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm10840Q3V2K9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm10840Q3V2K9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm10840Q3V2K9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Gm10840Q3V2K9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm10840Q3V2K9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm10840Q3V2K9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm10840Q3V2K9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm10840Q3V2K9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm10840Q3V2K9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm10840Q3V2K9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.83■□□□□ 0.76
Gm10840Q3V2K9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Gm10840Q3V2K9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm10840Q3V2K9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10840Q3V2K9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10840Q3V2K9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10840Q3V2K9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10840Q3V2K9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10840Q3V2K9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10840Q3V2K9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm10840Q3V2K9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Gm10840Q3V2K9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm10840Q3V2K9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Gm10840Q3V2K9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Gm10840Q3V2K9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm10840Q3V2K9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Gm10840Q3V2K9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.77■□□□□ 0.76
Gm10840Q3V2K9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gm10840Q3V2K9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm10840Q3V2K9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm10840Q3V2K9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm10840Q3V2K9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm10840Q3V2K9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Gm10840Q3V2K9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm10840Q3V2K9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm10840Q3V2K9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm10840Q3V2K9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Gm10840Q3V2K9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Gm10840Q3V2K9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Gm10840Q3V2K9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10840Q3V2K9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10840Q3V2K9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10840Q3V2K9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10840Q3V2K9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm10840Q3V2K9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm10840Q3V2K9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.73■□□□□ 0.75
Gm10840Q3V2K9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm10840Q3V2K9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gm10840Q3V2K9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm10840Q3V2K9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm10840Q3V2K9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm10840Q3V2K9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm10840Q3V2K9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Gm10840Q3V2K9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm10840Q3V2K9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm10840Q3V2K9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm10840Q3V2K9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm10840Q3V2K9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm10840Q3V2K9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm10840Q3V2K9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm10840Q3V2K9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm10840Q3V2K9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm10840Q3V2K9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gm10840Q3V2K9 Gm30023-201ENSMUST00000197970 889 ntBASIC19.69■□□□□ 0.74
Gm10840Q3V2K9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm10840Q3V2K9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gm10840Q3V2K9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Gm10840Q3V2K9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Gm10840Q3V2K9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm10840Q3V2K9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.67■□□□□ 0.74
Gm10840Q3V2K9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm10840Q3V2K9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm10840Q3V2K9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Gm10840Q3V2K9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm10840Q3V2K9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.66■□□□□ 0.74
Gm10840Q3V2K9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm10840Q3V2K9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm10840Q3V2K9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gm10840Q3V2K9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm10840Q3V2K9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm10840Q3V2K9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms