Protein–RNA interactions for Protein: Q3V053

4933427I04Rik, Riken cDNA 4933427I04 gene, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933427I04RikQ3V053 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27■■□□□ 1.91
4933427I04RikQ3V053 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
4933427I04RikQ3V053 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
4933427I04RikQ3V053 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.99■■□□□ 1.91
4933427I04RikQ3V053 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.98■■□□□ 1.91
4933427I04RikQ3V053 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
4933427I04RikQ3V053 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
4933427I04RikQ3V053 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.98■■□□□ 1.91
4933427I04RikQ3V053 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
4933427I04RikQ3V053 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
4933427I04RikQ3V053 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
4933427I04RikQ3V053 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
4933427I04RikQ3V053 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
4933427I04RikQ3V053 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
4933427I04RikQ3V053 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
4933427I04RikQ3V053 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
4933427I04RikQ3V053 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.94■■□□□ 1.9
4933427I04RikQ3V053 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
4933427I04RikQ3V053 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
4933427I04RikQ3V053 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
4933427I04RikQ3V053 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
4933427I04RikQ3V053 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
4933427I04RikQ3V053 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
4933427I04RikQ3V053 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
4933427I04RikQ3V053 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
4933427I04RikQ3V053 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
4933427I04RikQ3V053 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
4933427I04RikQ3V053 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.91■■□□□ 1.9
4933427I04RikQ3V053 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.9■■□□□ 1.9
4933427I04RikQ3V053 Gm7432-201ENSMUST00000210343 879 ntBASIC26.9■■□□□ 1.9
4933427I04RikQ3V053 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
4933427I04RikQ3V053 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.88■■□□□ 1.89
4933427I04RikQ3V053 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
4933427I04RikQ3V053 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
4933427I04RikQ3V053 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
4933427I04RikQ3V053 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
4933427I04RikQ3V053 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
4933427I04RikQ3V053 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
4933427I04RikQ3V053 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
4933427I04RikQ3V053 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.83■■□□□ 1.89
4933427I04RikQ3V053 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
4933427I04RikQ3V053 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
4933427I04RikQ3V053 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
4933427I04RikQ3V053 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
4933427I04RikQ3V053 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
4933427I04RikQ3V053 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.81■■□□□ 1.88
4933427I04RikQ3V053 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.81■■□□□ 1.88
4933427I04RikQ3V053 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
4933427I04RikQ3V053 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
4933427I04RikQ3V053 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.78■■□□□ 1.88
4933427I04RikQ3V053 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
4933427I04RikQ3V053 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.77■■□□□ 1.88
4933427I04RikQ3V053 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
4933427I04RikQ3V053 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
4933427I04RikQ3V053 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
4933427I04RikQ3V053 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
4933427I04RikQ3V053 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.76■■□□□ 1.87
4933427I04RikQ3V053 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.76■■□□□ 1.87
4933427I04RikQ3V053 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
4933427I04RikQ3V053 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
4933427I04RikQ3V053 Gm11599-201ENSMUST00000118720 878 ntBASIC26.74■■□□□ 1.87
4933427I04RikQ3V053 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
4933427I04RikQ3V053 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
4933427I04RikQ3V053 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
4933427I04RikQ3V053 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
4933427I04RikQ3V053 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.72■■□□□ 1.87
4933427I04RikQ3V053 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
4933427I04RikQ3V053 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
4933427I04RikQ3V053 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
4933427I04RikQ3V053 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
4933427I04RikQ3V053 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
4933427I04RikQ3V053 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
4933427I04RikQ3V053 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.68■■□□□ 1.86
4933427I04RikQ3V053 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
4933427I04RikQ3V053 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
4933427I04RikQ3V053 Particl-201ENSMUST00000205370 1560 ntBASIC26.67■■□□□ 1.86
4933427I04RikQ3V053 Amer2-203ENSMUST00000225247 2662 ntBASIC26.66■■□□□ 1.86
4933427I04RikQ3V053 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
4933427I04RikQ3V053 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
4933427I04RikQ3V053 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
4933427I04RikQ3V053 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
4933427I04RikQ3V053 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
4933427I04RikQ3V053 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
4933427I04RikQ3V053 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.63■■□□□ 1.85
4933427I04RikQ3V053 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
4933427I04RikQ3V053 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.63■■□□□ 1.85
4933427I04RikQ3V053 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
4933427I04RikQ3V053 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
4933427I04RikQ3V053 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
4933427I04RikQ3V053 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.62■■□□□ 1.85
4933427I04RikQ3V053 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
4933427I04RikQ3V053 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
4933427I04RikQ3V053 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
4933427I04RikQ3V053 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.61■■□□□ 1.85
4933427I04RikQ3V053 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
4933427I04RikQ3V053 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
4933427I04RikQ3V053 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
4933427I04RikQ3V053 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
4933427I04RikQ3V053 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
4933427I04RikQ3V053 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms