Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cdkl5Q3UTQ8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cdkl5Q3UTQ8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.74■■■□□ 2.03
Cdkl5Q3UTQ8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Cdkl5Q3UTQ8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cdkl5Q3UTQ8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cdkl5Q3UTQ8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Cdkl5Q3UTQ8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Cdkl5Q3UTQ8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Cdkl5Q3UTQ8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
Cdkl5Q3UTQ8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Cdkl5Q3UTQ8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
Cdkl5Q3UTQ8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Cdkl5Q3UTQ8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Cdkl5Q3UTQ8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Cdkl5Q3UTQ8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Cdkl5Q3UTQ8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Cdkl5Q3UTQ8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Cdkl5Q3UTQ8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Cdkl5Q3UTQ8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
Cdkl5Q3UTQ8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cdkl5Q3UTQ8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.68■■■□□ 2.02
Cdkl5Q3UTQ8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Cdkl5Q3UTQ8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Cdkl5Q3UTQ8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Cdkl5Q3UTQ8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
Cdkl5Q3UTQ8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.01
Cdkl5Q3UTQ8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.63■■■□□ 2.01
Cdkl5Q3UTQ8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.63■■■□□ 2.01
Cdkl5Q3UTQ8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Cdkl5Q3UTQ8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.62■■■□□ 2.01
Cdkl5Q3UTQ8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Cdkl5Q3UTQ8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cdkl5Q3UTQ8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cdkl5Q3UTQ8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Cdkl5Q3UTQ8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.61■■■□□ 2.01
Cdkl5Q3UTQ8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cdkl5Q3UTQ8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cdkl5Q3UTQ8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Cdkl5Q3UTQ8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Cdkl5Q3UTQ8 Gm30023-201ENSMUST00000197970 889 ntBASIC27.6■■■□□ 2.01
Cdkl5Q3UTQ8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Cdkl5Q3UTQ8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Cdkl5Q3UTQ8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Cdkl5Q3UTQ8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Cdkl5Q3UTQ8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.59■■■□□ 2.01
Cdkl5Q3UTQ8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cdkl5Q3UTQ8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2.01
Cdkl5Q3UTQ8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cdkl5Q3UTQ8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cdkl5Q3UTQ8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.56■■■□□ 2
Cdkl5Q3UTQ8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Cdkl5Q3UTQ8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.56■■■□□ 2
Cdkl5Q3UTQ8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.55■■■□□ 2
Cdkl5Q3UTQ8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.55■■■□□ 2
Cdkl5Q3UTQ8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
Cdkl5Q3UTQ8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.54■■■□□ 2
Cdkl5Q3UTQ8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
Cdkl5Q3UTQ8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.53■■■□□ 2
Cdkl5Q3UTQ8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Cdkl5Q3UTQ8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
Cdkl5Q3UTQ8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cdkl5Q3UTQ8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cdkl5Q3UTQ8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Cdkl5Q3UTQ8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Cdkl5Q3UTQ8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cdkl5Q3UTQ8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cdkl5Q3UTQ8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Cdkl5Q3UTQ8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Cdkl5Q3UTQ8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cdkl5Q3UTQ8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.48■■□□□ 1.99
Cdkl5Q3UTQ8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.48■■□□□ 1.99
Cdkl5Q3UTQ8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cdkl5Q3UTQ8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cdkl5Q3UTQ8 Nkain2-201ENSMUST00000092602 558 ntBASIC27.47■■□□□ 1.99
Cdkl5Q3UTQ8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cdkl5Q3UTQ8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Cdkl5Q3UTQ8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.46■■□□□ 1.99
Cdkl5Q3UTQ8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Cdkl5Q3UTQ8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Cdkl5Q3UTQ8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Cdkl5Q3UTQ8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.45■■□□□ 1.98
Cdkl5Q3UTQ8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
Cdkl5Q3UTQ8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.45■■□□□ 1.98
Cdkl5Q3UTQ8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cdkl5Q3UTQ8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cdkl5Q3UTQ8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Cdkl5Q3UTQ8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
Cdkl5Q3UTQ8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Cdkl5Q3UTQ8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Cdkl5Q3UTQ8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.43■■□□□ 1.98
Cdkl5Q3UTQ8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Cdkl5Q3UTQ8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Cdkl5Q3UTQ8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.42■■□□□ 1.98
Cdkl5Q3UTQ8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Cdkl5Q3UTQ8 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.4■■□□□ 1.98
Cdkl5Q3UTQ8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cdkl5Q3UTQ8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Cdkl5Q3UTQ8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Cdkl5Q3UTQ8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms