Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
Uspl1Q3ULM6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Uspl1Q3ULM6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
Uspl1Q3ULM6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Uspl1Q3ULM6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Uspl1Q3ULM6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Uspl1Q3ULM6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Uspl1Q3ULM6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.49■■■□□ 2.63
Uspl1Q3ULM6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Uspl1Q3ULM6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Uspl1Q3ULM6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Uspl1Q3ULM6 Gm30023-201ENSMUST00000197970 889 ntBASIC31.48■■■□□ 2.63
Uspl1Q3ULM6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.46■■■□□ 2.63
Uspl1Q3ULM6 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.45■■■□□ 2.63
Uspl1Q3ULM6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.44■■■□□ 2.62
Uspl1Q3ULM6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Uspl1Q3ULM6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
Uspl1Q3ULM6 Nkain2-201ENSMUST00000092602 558 ntBASIC31.43■■■□□ 2.62
Uspl1Q3ULM6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Uspl1Q3ULM6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Uspl1Q3ULM6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Uspl1Q3ULM6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
Uspl1Q3ULM6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.39■■■□□ 2.62
Uspl1Q3ULM6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.39■■■□□ 2.62
Uspl1Q3ULM6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Uspl1Q3ULM6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
Uspl1Q3ULM6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Uspl1Q3ULM6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Uspl1Q3ULM6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Uspl1Q3ULM6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Uspl1Q3ULM6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Uspl1Q3ULM6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Uspl1Q3ULM6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Uspl1Q3ULM6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
Uspl1Q3ULM6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Uspl1Q3ULM6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Uspl1Q3ULM6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Uspl1Q3ULM6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Uspl1Q3ULM6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Uspl1Q3ULM6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Uspl1Q3ULM6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Uspl1Q3ULM6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Uspl1Q3ULM6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
Uspl1Q3ULM6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Uspl1Q3ULM6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Uspl1Q3ULM6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC31.3■■■□□ 2.6
Uspl1Q3ULM6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Uspl1Q3ULM6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Uspl1Q3ULM6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Uspl1Q3ULM6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.28■■■□□ 2.6
Uspl1Q3ULM6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.28■■■□□ 2.6
Uspl1Q3ULM6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Uspl1Q3ULM6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Uspl1Q3ULM6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Uspl1Q3ULM6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.27■■■□□ 2.6
Uspl1Q3ULM6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Uspl1Q3ULM6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Uspl1Q3ULM6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Uspl1Q3ULM6 Gm8503-201ENSMUST00000118131 455 ntBASIC31.25■■■□□ 2.59
Uspl1Q3ULM6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Uspl1Q3ULM6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Uspl1Q3ULM6 Gm6821-201ENSMUST00000107540 542 ntBASIC31.23■■■□□ 2.59
Uspl1Q3ULM6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.22■■■□□ 2.59
Uspl1Q3ULM6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Uspl1Q3ULM6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Uspl1Q3ULM6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Uspl1Q3ULM6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Uspl1Q3ULM6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.19■■■□□ 2.58
Uspl1Q3ULM6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.18■■■□□ 2.58
Uspl1Q3ULM6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Uspl1Q3ULM6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC31.18■■■□□ 2.58
Uspl1Q3ULM6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Uspl1Q3ULM6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Uspl1Q3ULM6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Uspl1Q3ULM6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Uspl1Q3ULM6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.16■■■□□ 2.58
Uspl1Q3ULM6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.16■■■□□ 2.58
Uspl1Q3ULM6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Uspl1Q3ULM6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Uspl1Q3ULM6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Uspl1Q3ULM6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Uspl1Q3ULM6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Uspl1Q3ULM6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.12■■■□□ 2.57
Uspl1Q3ULM6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Uspl1Q3ULM6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
Uspl1Q3ULM6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
Uspl1Q3ULM6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.09■■■□□ 2.57
Uspl1Q3ULM6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Uspl1Q3ULM6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.08■■■□□ 2.57
Uspl1Q3ULM6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.07■■■□□ 2.56
Uspl1Q3ULM6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Uspl1Q3ULM6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.07■■■□□ 2.56
Uspl1Q3ULM6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Uspl1Q3ULM6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Uspl1Q3ULM6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Uspl1Q3ULM6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Uspl1Q3ULM6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Uspl1Q3ULM6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
Uspl1Q3ULM6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.04■■■□□ 2.56
Uspl1Q3ULM6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms