Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
Pdlim4P70271 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim4P70271 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pdlim4P70271 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim4P70271 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim4P70271 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim4P70271 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim4P70271 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pdlim4P70271 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim4P70271 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Pdlim4P70271 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.75■□□□□ 0.75
Pdlim4P70271 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim4P70271 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim4P70271 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim4P70271 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pdlim4P70271 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pdlim4P70271 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pdlim4P70271 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim4P70271 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim4P70271 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.69■□□□□ 0.74
Pdlim4P70271 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pdlim4P70271 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pdlim4P70271 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.68■□□□□ 0.74
Pdlim4P70271 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pdlim4P70271 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pdlim4P70271 Nkain2-201ENSMUST00000092602 558 ntBASIC19.67■□□□□ 0.74
Pdlim4P70271 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim4P70271 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pdlim4P70271 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim4P70271 Gm6821-201ENSMUST00000107540 542 ntBASIC19.66■□□□□ 0.74
Pdlim4P70271 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pdlim4P70271 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdlim4P70271 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Pdlim4P70271 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdlim4P70271 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Pdlim4P70271 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pdlim4P70271 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pdlim4P70271 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pdlim4P70271 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pdlim4P70271 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.63■□□□□ 0.73
Pdlim4P70271 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.63■□□□□ 0.73
Pdlim4P70271 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.62■□□□□ 0.73
Pdlim4P70271 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim4P70271 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim4P70271 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.61■□□□□ 0.73
Pdlim4P70271 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim4P70271 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Pdlim4P70271 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.61■□□□□ 0.73
Pdlim4P70271 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.6■□□□□ 0.73
Pdlim4P70271 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.6■□□□□ 0.73
Pdlim4P70271 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pdlim4P70271 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pdlim4P70271 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim4P70271 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.59■□□□□ 0.73
Pdlim4P70271 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim4P70271 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim4P70271 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim4P70271 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim4P70271 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim4P70271 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim4P70271 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim4P70271 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Pdlim4P70271 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim4P70271 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim4P70271 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim4P70271 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim4P70271 Gm8503-201ENSMUST00000118131 455 ntBASIC19.55■□□□□ 0.72
Pdlim4P70271 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim4P70271 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim4P70271 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.54■□□□□ 0.72
Pdlim4P70271 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pdlim4P70271 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim4P70271 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim4P70271 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim4P70271 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim4P70271 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim4P70271 Gm30023-201ENSMUST00000197970 889 ntBASIC19.53■□□□□ 0.72
Pdlim4P70271 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim4P70271 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim4P70271 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.52■□□□□ 0.72
Pdlim4P70271 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim4P70271 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim4P70271 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim4P70271 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Pdlim4P70271 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim4P70271 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.51■□□□□ 0.71
Pdlim4P70271 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim4P70271 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim4P70271 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim4P70271 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim4P70271 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim4P70271 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim4P70271 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.49■□□□□ 0.71
Pdlim4P70271 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim4P70271 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.49■□□□□ 0.71
Pdlim4P70271 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim4P70271 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim4P70271 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim4P70271 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim4P70271 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms